ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_2SRC-7.PDB
Scoring matrix: BBC1_2SRC-7_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 12.9
Foldx random average score for Saccharomyces cerevisiae: 10.704

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 944219
Proteins after disorder filtering: 3145
 Total fragments: 54361
Proteins after pattern filtering: 1577
 Total fragments: 10938
Proteins after MINT filtering: 28
 Total fragments: 647

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAA

12.90

-2.88

0.00

Best peptides

WMPIPPMR

0.00

-7.27

-4.39

         
Interactors      
Q06604

PPPLPTRR

3.46

-8.25

-5.37

PPSPPAKR

4.54

-8.07

-5.19

KPLLPTRP

5.51

-6.48

-3.60

P24583

PLPPQPRK

5.67

-7.15

-4.27

APLPPQPR

7.14

-6.18

-3.30

PPQPRKHD

8.37

-4.28

-1.40

Q06625

VLTLPPIP

6.23

-7.33

-4.45

PPIPLPKD

7.70

-5.61

-2.73

IPGTPRDG

8.84

-3.86

-0.98

P19812

PRRIPPTD

6.65

-6.04

-3.16

PQNPPPIL

7.79

-5.90

-3.02

PIFRPGNI

7.96

-5.44

-2.56

P53182

SRRNPGKP

8.49

-3.76

-0.88

P53169

MPTLPPRP

5.30

-8.11

-5.23

IMPTLPPR

5.64

-5.81

-2.93

VPIMPTLP

6.08

-7.50

-4.62

Q12043

FPSTPLFE

6.73

-5.43

-2.55

NPSRFPMD

7.19

-5.53

-2.65

APGRFPLQ

7.58

-5.56

-2.68

P40453

VPEPPSWK

4.96

-7.68

-4.80

PPPLPPKI

5.09

-7.69

-4.81

PPDLPIRL

5.88

-7.54

-4.66

P53971

EKACPFLP

7.62

-6.89

-4.01

CPFLPSSL

8.26

-4.66

-1.78

PFLPSSLK

8.42

-6.31

-3.43

Q12168

PPPLPPRA

4.75

-8.14

-5.26

DPYFPQFR

5.57

-5.34

-2.46

PPPVPNRP

6.37

-6.61

-3.73

P27472

PGSPRDLR

6.50

-5.26

-2.38

PLSVPGSP

9.15

-5.06

-2.18

VPGSPRDL

9.65

-4.47

-1.59

P36006

PPPPPPMG

5.24

-7.99

-5.11

IPPPPPPM

6.15

-5.11

-2.23

QPKDPKFE

7.49

-4.65

-1.77

P32790

PPIKPPRP

6.06

-7.89

-5.01

PPAMPARP

6.14

-7.51

-4.63

KPPRPTST

6.40

-6.10

-3.22

Q06440

TPKVEPSK

9.85

-2.47

0.41

Q06412

PPPPPPLL

5.47

-6.74

-3.86

TKPPPPLS

5.65

-6.22

-3.34

PPPPPLLY

5.72

-6.86

-3.98

P34226

VPVPPPQL

6.44

-6.59

-3.71

PVPPPQLH

6.49

-6.48

-3.60

FVPVPPPQ

7.30

-6.25

-3.37

P36102

PMQPPPIE

6.61

-5.54

-2.66

PRIYPPPH

6.99

-6.24

-3.36

PPMQPPPI

8.02

-6.40

-3.52

P53933

PPPLPNRQ

5.66

-7.64

-4.76

RRPPPPPI

6.32

-5.94

-3.06

RPPPPPIP

6.45

-7.37

-4.49

Q04439

IPTPPQNR

5.77

-5.98

-3.10

APPPPGMQ

6.34

-7.08

-4.20

KPKEPMFE

6.59

-5.61

-2.73

Q12446

VPPPPPMR

2.58

-9.12

-6.24

APPPPPRR

3.66

-8.58

-5.70

APPPPPHR

4.70

-6.46

-3.58

P39969

QPPKSPLL

5.86

-6.49

-3.61

FKLLPPQP

6.55

-6.36

-3.48

VSPRRAPK

6.85

-4.89

-2.01

P37370

RPHMPSVR

4.91

-8.22

-5.34

APPIPGMG

5.12

-7.69

-4.81

QMPKPRPF

5.51

-6.81

-3.93

P53739

TPIMPSQN

7.26

-6.39

-3.51

SPSTPIMP

8.23

-6.39

-3.51

SPASPPLS

8.27

-4.47

-1.59

P40563

PSERPKRR

3.84

-7.97

-5.09

PPPVPKKP

6.48

-6.51

-3.63

TPKVPERP

6.71

-5.87

-2.99

P40325

QPPRPPRP

4.18

-7.14

-4.26

QPRPPPRP

5.30

-6.73

-3.85

PWTYPPRF

5.49

-7.22

-4.34

Q04195

PQNVPIRT

7.40

-6.77

-3.89

TPVLPTLP

7.43

-5.27

-2.39

QNSTPVLP

7.54

-5.25

-2.37

Q07555

PASRPSLN

6.35

-6.36

-3.48

KTKVPKLP

6.42

-6.91

-4.03

KVPKLPLP

6.88

-6.39

-3.51

Q05080

KPDKPRPI

6.62

-6.75

-3.87

PDKPRPIV

7.57

-5.23

-2.35

QKPDKPRP

7.91

-3.18

-0.30

 


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