ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_2SRC-15.PDB
Scoring matrix: BBC1_2SRC-15_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 15.6
Foldx random average score for Saccharomyces cerevisiae: 11.815

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2175611
Proteins after random average filtering: 5078
 Total fragments: 896007
Proteins after disorder filtering: 2841
 Total fragments: 31105
Proteins after pattern filtering: 1269
 Total fragments: 4483
Proteins after MINT filtering: 27
 Total fragments: 218

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

15.60

-1.17

0.00

Best peptides

RPFIRFKRR

0.00

-6.17

-5.00

         
Interactors      
Q06604

GPRMPSRGR

7.55

-5.24

-4.07

SPPPLPTRR

8.55

-4.85

-3.68

EKGPRMPSR

8.82

-4.17

-3.00

P24583

LPPQPRKHD

9.47

-5.42

-4.25

PPQPRKHDK

10.15

-4.18

-3.01

NAPLPPQPR

10.30

-5.71

-4.54

Q06625

IPGTPRDGA

9.90

-5.00

-3.83

LPPIPLPKD

10.03

-7.08

-5.91

SVGIPGTPR

10.87

-4.28

-3.11

P19812

SPIFRPGNI

7.96

-3.35

-2.18

RPRRIPPTD

9.29

-4.53

-3.36

HSPIFRPGN

10.47

-3.84

-2.67

P53169

MPTLPPRPY

11.03

-6.65

-5.48

IMPTLPPRP

11.12

-4.55

-3.38

SVPIMPTLP

11.41

-4.21

-3.04

Q12043

LPGVFPSTP

9.36

-6.97

-5.80

LFNPSRFPM

9.47

-5.03

-3.86

NPSRFPMDA

9.80

-3.82

-2.65

P40453

IPPPLPPKI

7.92

-5.44

-4.27

PPPVSMPTT

8.05

-6.42

-5.25

PPDLPIRLR

8.18

-7.22

-6.05

P53971

CPFLPSSLK

9.58

-4.66

-3.49

HPGKCPPCL

10.79

-4.21

-3.04

Q12168

QHPVPKPNI

7.96

-6.65

-5.48

DDPYFPQFR

9.35

-3.05

-1.88

PPLPPRANV

10.03

-5.23

-4.06

P27472

VPGSPRDLR

7.45

-4.44

-3.27

PLSVPGSPR

10.55

-4.01

-2.84

P36006

PPPPPPMGQ

11.69

-4.77

-3.60

P32790

KPPRPTSTT

8.27

-4.61

-3.44

LPPIKPPRP

9.04

-7.19

-6.02

GPPPAMPAR

9.13

-4.71

-3.54

Q06440

RTPKVEPSK

10.75

-2.80

-1.63

Q06412

SPMVSPSSQ

9.01

-3.55

-2.38

PPPPLSTSR

9.22

-4.18

-3.01

RPPPPPPLL

10.03

-6.97

-5.80

P34226

FVPVPPPQL

10.27

-5.21

-4.04

VPVPPPQLH

11.57

-5.33

-4.16

P36102

PPPMQPPPI

8.77

-6.24

-5.07

NYDPFNAPI

10.04

-2.20

-1.03

NAPIFTPSS

10.05

-3.52

-2.35

P53933

PPPIPSTQK

9.18

-5.66

-4.49

PPPLPNRQL

10.30

-5.13

-3.96

PPPPIPSTQ

10.65

-3.87

-2.70

Q04439

NIPTPPQNR

7.36

-5.33

-4.16

KPAPPPPGM

9.08

-6.64

-5.47

RPSPPTAAT

9.75

-4.43

-3.26

Q12446

LPPASPEVR

6.97

-5.75

-4.58

RPLPQLPNR

7.47

-6.14

-4.97

PPPPPRASR

7.94

-7.89

-6.72

P39969

LSPIPSPTR

6.84

-5.14

-3.97

LPPQPGSKK

9.71

-4.12

-2.95

QPPKSPLLN

10.08

-4.86

-3.69

P37370

NRPHMPSVR

7.51

-3.97

-2.80

KVPQNRPHM

7.87

-5.36

-4.19

RPSPISPSI

8.19

-3.56

-2.39

P53739

RRSPSTPIM

8.18

-5.35

-4.18

FPQEPSPKI

9.18

-3.98

-2.81

RRRSPSTPI

11.13

-3.02

-1.85

P40563

NPGQLPPSL

10.71

-3.43

-2.26

EVTPKVPER

10.78

-2.48

-1.31

RAPPPVPKK

11.00

-5.41

-4.24

P40325

RPHQRPSTM

4.74

-7.39

-6.22

RPSTMPATS

8.88

-4.43

-3.26

RPPRPAANL

8.94

-4.59

-3.42

Q04195

NEPIQFPFP

8.81

-4.92

-3.75

VLPTLPQNV

9.62

-3.63

-2.46

LPQNVPIRT

9.82

-4.97

-3.80

Q07555

LPASRPSLN

10.14

-3.71

-2.54

PKLPLPASR

10.56

-4.36

-3.19

SPQKVPTGT

11.47

-3.49

-2.32

Q05080

KPDKPRPIV

7.67

-6.02

-4.85

LRQKPDKPR

10.63

-7.10

-5.93

 


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