ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-9.PDB
Scoring matrix: BBC1_1ZUK3-9_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 16.94
Foldx random average score for Saccharomyces cerevisiae: 13.273

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 922807
Proteins after disorder filtering: 3042
 Total fragments: 47281
Proteins after pattern filtering: 1541
 Total fragments: 9850
Proteins after MINT filtering: 28
 Total fragments: 551

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

16.94

-0.84

0.00

Best peptides

WRPRHFRM

0.00

-5.29

-4.45

         
Interactors      
Q06604

LPTRPNKA

5.68

-9.16

-8.31

KPLLPTRP

7.63

-7.87

-7.03

GPRMPSRG

8.81

-7.54

-6.70

P24583

LPPQPRKH

7.18

-5.68

-4.84

PLPPQPRK

11.13

-5.58

-4.74

NAPLPPQP

11.17

-5.82

-4.98

Q06625

LPPIPLPK

7.20

-5.35

-4.50

VLTLPPIP

10.34

-6.25

-5.41

IPLPKDAP

11.37

-5.21

-4.37

P19812

PRPRRIPP

6.16

-7.07

-6.23

PIFRPGNI

9.27

-6.93

-6.09

PRRIPPTD

9.35

-5.48

-4.64

P53182

SRRNPGKP

8.08

-6.07

-5.23

RRNPGKPP

11.09

-3.99

-3.15

P53169

MPTLPPRP

6.44

-9.37

-8.52

VPIMPTLP

8.18

-8.38

-7.54

ANSVPIMP

9.93

-6.80

-5.96

Q12043

NPSRFPMD

5.72

-4.90

-4.06

APGRFPLQ

7.69

-7.54

-6.70

FPSTPLFE

9.50

-7.15

-6.31

P40453

LRKRPPPP

3.91

-10.13

-9.29

KRPPPPPP

8.01

-7.19

-6.35

MPTTPEIP

8.47

-8.32

-7.48

P53971

EKACPFLP

8.63

-7.14

-6.29

NPDPNPLD

11.45

-4.06

-3.21

CPFLPSSL

11.70

-4.93

-4.09

Q12168

PPPVPNRP

7.35

-9.12

-8.27

NRGPPPLP

8.02

-6.16

-5.32

VPNRPGGT

8.70

-7.04

-6.20

P27472

PLSVPGSP

11.38

-5.73

-4.89

VPGSPRDL

13.16

-4.34

-3.50

P36006

NIPIPPPP

8.92

-7.12

-6.28

IPPPPPPM

9.25

-6.63

-5.79

PPPPPPMG

9.82

-7.05

-6.21

P32790

PPAMPARP

6.48

-9.05

-8.21

PPIKPPRP

7.01

-9.36

-8.51

KPPRPTST

7.45

-6.86

-6.02

Q06440

DRTPKVEP

11.50

-2.70

-1.86

Q06412

KERRPPPP

7.16

-7.75

-6.91

RRPPPPPP

7.72

-7.64

-6.79

FFTKPPPP

8.82

-8.10

-7.25

P34226

FVPVPPPQ

10.79

-7.76

-6.92

VPVPPPQL

11.04

-6.47

-5.63

EDFVPVPP

11.28

-5.61

-4.77

P36102

YPRIYPPP

8.24

-5.68

-4.84

LKYPRIYP

9.18

-4.58

-3.74

PRIYPPPH

9.74

-5.97

-5.13

P53933

TRRRPPPP

5.99

-9.02

-8.17

RRPPPPPI

7.91

-7.50

-6.66

RRRPPPPP

8.01

-7.64

-6.79

Q04439

KKPAPPPP

9.32

-6.19

-5.35

IPPPPPPP

9.75

-6.32

-5.48

KPKEPMFE

9.79

-6.14

-5.29

Q12446

NRPVPPPP

7.01

-7.35

-6.50

NRPLPQLP

7.90

-6.11

-5.27

RNNRPVPP

8.29

-7.51

-6.67

P39969

SPRRAPKP

7.73

-7.33

-6.49

FKLLPPQP

8.79

-7.93

-7.09

VSPRRAPK

9.01

-4.25

-3.41

P37370

PQNRPHMP

6.69

-8.84

-8.00

PKPRPFQN

7.68

-7.99

-7.15

APPIPGMG

7.78

-6.75

-5.91

P53739

SPSTPIMP

9.02

-5.76

-4.92

RRRSPSTP

9.05

-6.38

-5.54

FPQEPSPK

10.51

-6.98

-6.14

P40563

PSERPKRR

7.03

-7.81

-6.96

TPKVPERP

7.59

-8.59

-7.75

PPPVPKKP

8.16

-9.46

-8.62

P40325

QPPRPPRP

3.45

-8.85

-8.00

RPPRPAAN

7.09

-8.44

-7.59

QPRPPPRP

7.88

-7.96

-7.12

Q04195

EPIQFPFP

9.15

-5.68

-4.84

PQNVPIRT

9.67

-6.25

-5.41

NEPIQFPF

10.36

-4.66

-3.82

Q07555

KVPKLPLP

8.95

-6.96

-6.12

LPLPASRP

9.08

-7.30

-6.46

KTKVPKLP

9.79

-7.20

-6.36

Q05080

LRQKPDKP

6.14

-8.87

-8.02

QKPDKPRP

7.91

-6.23

-5.39

KPDKPRPI

8.58

-6.72

-5.88

 


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