ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-8.PDB
Scoring matrix: BBC1_1ZUK3-8_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 17.89
Foldx random average score for Saccharomyces cerevisiae: 14.108

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 914970
Proteins after disorder filtering: 2974
 Total fragments: 46146
Proteins after pattern filtering: 1497
 Total fragments: 9349
Proteins after MINT filtering: 28
 Total fragments: 557

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

17.89

1.14

0.00

Best peptides

DWRPRRHF

0.00

-1.46

-2.60

         
Interactors      
Q06604

PRMPSRGR

8.42

-2.59

-3.73

LLPTRPNK

8.44

-7.22

-8.36

SPPPLPTR

8.79

-8.02

-9.16

P24583

LPPQPRKH

8.57

-3.79

-4.93

PPQPRKHD

10.37

-3.37

-4.51

PLPPQPRK

10.43

-5.91

-7.05

Q06625

LPPIPLPK

10.53

-5.74

-6.88

IPLPKDAP

10.82

-1.69

-2.83

TLPPIPLP

11.62

-5.62

-6.76

P19812

EPRPRRIP

4.58

-4.84

-5.98

HSPIFRPG

9.67

-2.27

-3.41

RPRRIPPT

10.19

-5.70

-6.84

P53182

SRRNPGKP

12.69

-2.59

-3.73

RRNPGKPP

13.25

-2.18

-3.32

P53169

IMPTLPPR

8.92

-7.08

-8.22

PTLPPRPY

9.98

-2.19

-3.33

SVPIMPTL

10.52

-5.32

-6.46

Q12043

FNPSRFPM

8.10

-5.45

-6.59

AAPGRFPL

8.60

-5.19

-6.33

GRFPLQPL

10.25

-3.75

-4.89

P40453

IPPPLPPK

7.93

-8.35

-9.49

PDLPIRLR

8.39

-3.75

-4.89

KPPDLPIR

9.16

-7.10

-8.24

P53971

CHPGKCPP

11.08

-4.89

-6.03

ACPFLPSS

11.36

-5.40

-6.54

DPNPLDPN

12.61

-1.46

-2.60

Q12168

GPPPLPPR

7.90

-8.36

-9.50

IPPPVPNR

9.76

-7.00

-8.14

PVPNRPGG

9.84

-5.91

-7.05

P27472

PGSPRDLR

11.08

-2.14

-3.28

VPGSPRDL

11.70

-1.46

-2.60

RPLSVPGS

13.29

-4.27

-5.41

P36006

PKDPKFEA

9.23

-2.44

-3.58

GQPKDPKF

10.17

-5.24

-6.38

IPPPPPPM

10.65

-6.99

-8.13

P32790

LPPIKPPR

7.48

-8.21

-9.35

PPPAMPAR

9.24

-7.56

-8.70

IKPPRPTS

9.66

-6.38

-7.52

Q06440

TPKVEPSK

10.69

-4.81

-5.95

DRTPKVEP

12.54

-2.28

-3.42

Q06412

ERRPPPPP

9.91

-5.40

-6.54

SPKSPRDS

10.41

-1.28

-2.42

PNSPKSPR

10.75

-1.57

-2.71

P34226

FVPVPPPQ

11.55

-3.92

-5.06

PVPPPQLH

11.64

-2.29

-3.43

DFVPVPPP

12.66

-4.39

-5.53

P36102

YPRIYPPP

9.91

-5.25

-6.39

VPPPMQPP

10.85

-5.73

-6.87

KYPRIYPP

11.21

-5.82

-6.96

P53933

APPPLPNR

8.43

-8.27

-9.41

PPLPNRQL

9.74

-3.19

-4.33

RRRPPPPP

10.02

-5.09

-6.23

Q04439

SKPKEPMF

10.13

-5.16

-6.30

PPPSSKPK

10.19

-5.06

-6.20

SSKPKEPM

10.48

-1.74

-2.88

Q12446

PPPPRRGP

5.36

-5.76

-6.90

PPPPMRTT

8.28

-6.00

-7.14

PPPPRASR

8.50

-7.46

-8.60

P39969

AQPPKSPL

8.67

-3.60

-4.74

PRRAPKPP

9.94

-2.62

-3.76

VSPRRAPK

10.02

-5.38

-6.52

P37370

QMPKPRPF

6.98

-4.18

-5.32

KVPQNRPH

8.14

-2.70

-3.84

MPKPRPFQ

8.66

-6.28

-7.42

P53739

RRRSPSTP

12.18

-2.37

-3.51

STPIMPSQ

12.19

-4.66

-5.80

ASPPLSPT

12.64

-2.76

-3.90

P40563

APPPVPKK

9.34

-7.39

-8.53

PPVPKKPS

10.00

-4.69

-5.83

VTPKVPER

11.26

-5.15

-6.29

P40325

SQPPRPPR

6.41

-7.57

-8.71

PRPPPRPQ

7.74

-4.59

-5.73

PPRPPRPA

7.78

-3.25

-4.39

Q04195

NEPIQFPF

9.61

-4.75

-5.89

STPVLPTL

11.73

-6.00

-7.14

VLPTLPQN

12.10

-6.09

-7.23

Q07555

TKVPKLPL

9.71

-4.74

-5.88

KVPKLPLP

10.05

-5.62

-6.76

PLPASRPS

10.66

-2.68

-3.82

Q05080

KPDKPRPI

8.82

-2.18

-3.32

QKPDKPRP

9.45

-6.02

-7.16

RQKPDKPR

9.47

-2.78

-3.92

 


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