ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-4.PDB
Scoring matrix: BBC1_1ZUK3-4_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.98
Foldx random average score for Saccharomyces cerevisiae: 20.249

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 890661
Proteins after disorder filtering: 3043
 Total fragments: 61119
Proteins after pattern filtering: 1558
 Total fragments: 12217
Proteins after MINT filtering: 28
 Total fragments: 593

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

20.98

-3.64

0.00

Best peptides

RMRFHPRRRW

0.00

-7.06

-3.42

         
Interactors      
Q06604

RYSNIPSSKP

11.08

-10.09

-6.45

TMKNKPKPTP

11.85

-9.95

-6.31

SFEKGPRMPS

11.92

-9.50

-5.86

P24583

ANAPLPPQPR

14.59

-7.25

-3.61

ERANAPLPPQ

14.81

-6.66

-3.02

AERANAPLPP

14.88

-7.58

-3.94

Q06625

GIPGTPRDGA

13.66

-6.08

-2.44

GVLTLPPIPL

14.41

-8.38

-4.74

TLPPIPLPKD

14.85

-6.99

-3.35

P19812

HSPIFRPGNI

13.38

-5.49

-1.85

PRRIPPTDED

15.32

-7.33

-3.69

RPRRIPPTDE

15.81

-11.02

-7.38

P53182

SSRRNPGKPP

13.09

-9.72

-6.08

KSSRRNPGKP

14.19

-8.33

-4.69

P53169

SVPIMPTLPP

12.37

-9.75

-6.11

IMPTLPPRPY

14.62

-7.98

-4.34

TANSVPIMPT

17.75

-4.99

-1.35

Q12043

RFPLQPLPSP

10.26

-9.28

-5.64

NTLFNPSRFP

13.36

-1.92

1.72

TLFNPSRFPM

14.32

-6.87

-3.23

P40453

RLRKRPPPPP

6.36

-11.51

-7.87

RKRPPPPPPV

9.11

-9.95

-6.31

LRKRPPPPPP

10.15

-12.43

-8.79

P53971

QRKCHPGKCP

10.74

-8.99

-5.35

RKCHPGKCPP

11.54

-8.40

-4.76

GKVVNPDPNP

12.83

-7.56

-3.92

Q12168

NRGPPPLPPR

11.84

-8.65

-5.01

NKVQHPVPKP

11.93

-8.12

-4.48

TNRGPPPLPP

14.63

-10.18

-6.54

P27472

SVPGSPRDLR

11.15

-9.26

-5.62

RPLSVPGSPR

16.46

-8.81

-5.17

PLSVPGSPRD

19.35

-4.60

-0.96

P36006

NIPIPPPPPP

11.07

-8.83

-5.19

KKPKNPGGLS

13.29

-7.08

-3.44

ANIPIPPPPP

14.28

-10.08

-6.44

P32790

SSAPAPLDPF

15.58

-7.02

-3.38

LPPIKPPRPT

17.00

-8.26

-4.62

TVPAAPVSSA

18.08

-4.39

-0.75

Q06440

KKDRTPKVEP

10.19

-8.54

-4.90

Q06412

RRPPPPPPLL

9.84

-11.08

-7.44

KERRPPPPPP

10.61

-9.54

-5.90

YVKERRPPPP

11.02

-9.45

-5.81

P34226

FVPVPPPQLH

10.96

-9.23

-5.59

SLGSTPTNSP

14.34

-7.09

-3.45

DFVPVPPPQL

16.13

-5.77

-2.13

P36102

KYPRIYPPPH

10.79

-8.21

-4.57

NLKYPRIYPP

12.32

-6.87

-3.23

SNLKYPRIYP

14.21

-7.84

-4.20

P53933

RTRRRPPPPP

7.61

-13.81

-10.17

RRRPPPPPIP

7.89

-13.37

-9.73

TRRRPPPPPI

9.19

-11.25

-7.61

Q04439

RHSKKPAPPP

8.40

-9.88

-6.24

RQANIPPPPP

10.99

-9.40

-5.76

KKPAPPPPGM

11.94

-8.47

-4.83

Q12446

RLPAPPPPPR

8.59

-9.06

-5.42

RRGPAPPPPP

8.76

-12.22

-8.58

NRPVPPPPPM

10.26

-11.14

-7.50

P39969

RRAPKPPSYP

9.72

-11.58

-7.94

ARSSSPEENP

12.47

-9.48

-5.84

RAPKPPSYPS

13.61

-8.14

-4.50

P37370

SMPAPPPPPP

9.92

-10.76

-7.12

QMPKPRPFQN

10.20

-7.36

-3.72

NRPHMPSVRP

10.68

-8.65

-5.01

P53739

RRRSPSTPIM

11.11

-10.37

-6.73

FFPQEPSPKI

12.10

-8.81

-5.17

GRRRSPSTPI

12.32

-9.57

-5.93

P40563

RRAPPPVPKK

10.16

-10.42

-6.78

KRRAPPPVPK

10.66

-11.96

-8.32

PKRRAPPPVP

11.10

-8.87

-5.23

P40325

SRPHQRPSTM

9.61

-9.94

-6.30

SQPRPPPRPQ

9.97

-8.85

-5.21

GHQSRPHQRP

11.86

-10.29

-6.65

Q04195

RQNSTPVLPT

13.40

-5.73

-2.09

SRAPPPTNPD

14.54

-8.64

-5.00

SRGNEPIQFP

14.54

-10.24

-6.60

Q07555

WKTKVPKLPL

10.69

-8.06

-4.42

KVPKLPLPAS

13.43

-5.68

-2.04

PKLPLPASRP

14.27

-6.38

-2.74

Q05080

QKPDKPRPIV

9.25

-7.78

-4.14

RQKPDKPRPI

15.36

-8.36

-4.72

LRQKPDKPRP

15.92

-8.08

-4.44

 


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