ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-29.PDB
Scoring matrix: BBC1_1ZUK3-29_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.73
Foldx random average score for Saccharomyces cerevisiae: 14.917

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5077
 Total fragments: 970998
Proteins after disorder filtering: 2843
 Total fragments: 41855
Proteins after pattern filtering: 1460
 Total fragments: 10189
Proteins after MINT filtering: 28
 Total fragments: 590

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

20.73

-3.56

0.00

Best peptides

DLKPIPRRLR

0.00

-11.01

-7.45

         
Interactors      
Q06604

EKPLLPTRPN

5.67

-16.07

-12.51

SPPPLPTRRD

6.54

-16.56

-13.00

KGPRMPSRGR

7.48

-15.32

-11.76

P24583

APLPPQPRKH

8.21

-13.34

-9.78

PLPPQPRKHD

8.40

-12.39

-8.83

ANAPLPPQPR

11.17

-8.81

-5.25

Q06625

TLPPIPLPKD

9.78

-10.89

-7.33

GVLTLPPIPL

11.16

-10.52

-6.96

LTLPPIPLPK

11.56

-10.58

-7.02

P19812

PRPRRIPPTD

10.79

-10.33

-6.77

EPRPRRIPPT

11.23

-9.10

-5.54

HSPIFRPGNI

12.98

-7.10

-3.54

P53182

SSRRNPGKPP

11.02

-9.29

-5.73

P53169

IMPTLPPRPY

5.42

-16.03

-12.47

SVPIMPTLPP

10.23

-11.44

-7.88

TANSVPIMPT

11.70

-9.27

-5.71

Q12043

NTLFNPSRFP

8.32

-13.24

-9.68

SPSTSPQRSK

9.57

-12.36

-8.80

GRFPLQPLPS

11.34

-10.13

-6.57

P40453

KPPDLPIRLR

5.26

-17.29

-13.73

PDLPIRLRKR

5.76

-15.71

-12.15

RLRKRPPPPP

10.32

-11.03

-7.47

P53971

GEKACPFLPS

9.68

-10.20

-6.64

QRKCHPGKCP

11.42

-8.93

-5.37

ACPFLPSSLK

12.38

-10.47

-6.91

Q12168

IPPPVPNRPG

5.87

-15.53

-11.97

GPPPLPPRAN

7.63

-14.65

-11.09

KVQHPVPKPN

11.96

-8.45

-4.89

P27472

PGSPRDLRSN

10.97

-6.83

-3.27

SVPGSPRDLR

11.77

-9.67

-6.11

RPLSVPGSPR

12.44

-9.78

-6.22

P36006

ANIPIPPPPP

11.42

-9.45

-5.89

PIPPPPPPMG

11.70

-10.93

-7.37

KKPKNPGGLS

11.96

-9.62

-6.06

P32790

PPPAMPARPT

6.10

-15.79

-12.23

LPPIKPPRPT

6.19

-16.33

-12.77

IKPPRPTSTT

11.92

-9.54

-5.98

Q06440

DRTPKVEPSK

14.01

-7.22

-3.66

Q06412

RPPPPPPLLY

10.09

-12.04

-8.48

FTKPPPPLST

10.67

-9.71

-6.15

RRPPPPPPLL

10.91

-9.76

-6.20

P34226

FVPVPPPQLH

9.89

-9.52

-5.96

PVPPPQLHLN

10.68

-11.61

-8.05

DFVPVPPPQL

13.20

-8.15

-4.59

P36102

KYPRIYPPPH

10.27

-9.71

-6.15

SNLKYPRIYP

11.47

-10.77

-7.21

LKYPRIYPPP

12.14

-10.15

-6.59

P53933

APPPLPNRQL

7.09

-14.71

-11.15

RRPPPPPIPS

10.49

-11.17

-7.61

PPLPNRQLPN

11.23

-9.48

-5.92

Q04439

NNIPTPPQNR

10.53

-11.30

-7.74

SSKPKEPMFE

11.61

-9.14

-5.58

SKKPAPPPPG

11.65

-9.32

-5.76

Q12446

PLPQLPNRNN

6.03

-15.93

-12.37

PPPPRASRPT

7.40

-14.86

-11.30

PAPPPPPRRG

7.48

-15.18

-11.62

P39969

SPIPSPTRNS

8.20

-12.35

-8.79

AQPPKSPLLN

10.10

-9.83

-6.27

PSPAQPPKSP

10.81

-9.24

-5.68

P37370

APKVPQNRPH

7.65

-12.67

-9.11

VSQMPKPRPF

8.87

-11.59

-8.03

KVPQNRPHMP

9.17

-12.08

-8.52

P53739

RSPSTPIMPS

9.72

-10.61

-7.05

STPIMPSQNS

10.46

-11.37

-7.81

ASPASPPLSP

11.89

-9.55

-5.99

P40563

APPPVPKKPS

9.44

-11.52

-7.96

PSERPKRRAP

10.64

-10.55

-6.99

KRRAPPPVPK

11.53

-8.81

-5.25

P40325

SQPPRPPRPA

4.30

-17.94

-14.38

SQPRPPPRPQ

6.17

-16.50

-12.94

LPWTYPPRFY

8.20

-9.93

-6.37

Q04195

LPQNVPIRTN

8.31

-13.14

-9.58

TLPQNVPIRT

10.07

-11.36

-7.80

STPVLPTLPQ

10.93

-11.20

-7.64

Q07555

KLPLPASRPS

7.90

-14.24

-10.68

SWKTKVPKLP

10.20

-8.17

-4.61

TKVPKLPLPA

11.24

-10.90

-7.34

Q05080

RQKPDKPRPI

6.60

-13.67

-10.11

QKPDKPRPIV

11.40

-10.41

-6.85

PDKPRPIVGE

12.73

-7.82

-4.26

 


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