ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-15.PDB
Scoring matrix: BBC1_1ZUK3-15_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.1
Foldx random average score for Saccharomyces cerevisiae: 12.385

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2175611
Proteins after random average filtering: 5078
 Total fragments: 890252
Proteins after disorder filtering: 2681
 Total fragments: 23903
Proteins after pattern filtering: 1073
 Total fragments: 3468
Proteins after MINT filtering: 27
 Total fragments: 158

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

17.10

0.60

0.00

Best peptides

RPRRIWKIK

0.00

-2.52

-3.12

         
Interactors      
Q06604

PLLPTRPNK

8.82

-4.19

-4.79

MKNKPKPTP

9.64

-4.45

-5.05

PPLPTRRDH

10.00

-5.12

-5.72

P24583

LPPQPRKHD

9.22

-5.16

-5.76

PPQPRKHDK

10.25

-5.14

-5.74

APLPPQPRK

10.56

-3.62

-4.22

Q06625

LPPIPLPKD

8.16

-5.98

-6.58

IPGTPRDGA

9.05

-5.14

-5.74

P19812

RPRRIPPTD

8.57

-4.00

-4.60

HSPIFRPGN

9.19

-4.49

-5.09

PIFRPGNIF

10.26

-3.78

-4.38

P53169

NSVPIMPTL

10.40

-3.30

-3.90

Q12043

FPSTPLFEK

8.49

-5.67

-6.27

NPSRFPMDA

9.68

-2.70

-3.30

LFNPSRFPM

11.11

-3.25

-3.85

P40453

WKPPDLPIR

8.68

-5.58

-6.18

PDLPIRLRK

8.89

-4.25

-4.85

IPPPLPPKI

10.45

-4.59

-5.19

P53971

CPFLPSSLK

11.00

-5.09

-5.69

HPGKCPPCL

11.23

-3.77

-4.37

Q12168

QHPVPKPNI

9.61

-5.65

-6.25

PPVPNRPGG

11.52

-4.89

-5.49

PPLPPRANV

11.76

-4.07

-4.67

P27472

VPGSPRDLR

9.01

-5.55

-6.15

P36006

PPPMGQPKD

11.36

-4.55

-5.15

KKPKNPGGL

11.44

-3.18

-3.78

PKDPKFEAA

11.84

-2.91

-3.51

P32790

LPPIKPPRP

9.76

-6.86

-7.46

GPPPAMPAR

11.54

-5.85

-6.45

PAMPARPTA

11.66

-3.02

-3.62

Q06440

RTPKVEPSK

11.05

-1.59

-2.19

Q06412

PKLPPLNTR

10.48

-4.60

-5.20

KPPPPLSTS

11.02

-4.93

-5.53

RPPPPPPLL

11.43

-5.21

-5.81

P34226

FVPVPPPQL

12.25

-5.13

-5.73

P36102

KYPRIYPPP

9.32

-5.00

-5.60

NLKYPRIYP

10.42

-4.24

-4.84

YPRIYPPPH

11.03

-5.66

-6.26

P53933

PPPIPSTQK

10.28

-5.46

-6.06

VAPPPLPNR

11.47

-5.23

-5.83

PPLPNRQLP

11.64

-5.29

-5.89

Q04439

PPPPGMQNK

10.45

-6.69

-7.29

KPKEPMFEA

11.34

-4.66

-5.26

PPPSSKPKE

11.75

-3.54

-4.14

Q12446

RPLPQLPNR

8.77

-7.55

-8.15

PPPPPRASR

9.27

-6.97

-7.57

PPPPPHRHV

10.34

-6.54

-7.14

P39969

LSPIPSPTR

10.43

-4.31

-4.91

LPPQPGSKK

10.62

-4.50

-5.10

RRAPKPPSY

11.47

-2.38

-2.98

P37370

PKPRPFQNK

6.88

-5.50

-6.10

QMPKPRPFQ

7.97

-5.00

-5.60

KVPQNRPHM

9.28

-5.24

-5.84

P53739

RRSPSTPIM

11.45

-3.70

-4.30

GRRRSPSTP

11.92

-3.42

-4.02

PSTPIMPSQ

12.01

-1.97

-2.57

P40563

PSERPKRRA

8.38

-4.37

-4.97

RAPPPVPKK

10.59

-5.40

-6.00

PPPVPKKPS

11.89

-5.56

-6.16

P40325

HQSRPHQRP

8.08

-6.79

-7.39

NPSLPWTYP

8.54

-4.89

-5.49

RPPRPAANL

8.78

-4.99

-5.59

Q04195

NEPIQFPFP

10.00

-7.35

-7.95

NSTPVLPTL

10.29

-2.02

-2.62

LPTLPQNVP

11.54

-5.82

-6.42

Q07555

PLPASRPSL

10.37

-2.65

-3.25

WKTKVPKLP

11.02

-3.44

-4.04

VPKLPLPAS

11.26

-5.30

-5.90

Q05080

KPDKPRPIV

8.20

-4.67

-5.27

RQKPDKPRP

11.51

-3.48

-4.08

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER