ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-13.PDB
Scoring matrix: BBC1_1ZUK3-13_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 22.16
Foldx random average score for Saccharomyces cerevisiae: 15.797

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 977802
Proteins after disorder filtering: 3135
 Total fragments: 47809
Proteins after pattern filtering: 1431
 Total fragments: 6854
Proteins after MINT filtering: 28
 Total fragments: 345

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

22.16

1.87

0.00

Best peptides

RHRRHSRR

0.00

-6.43

-8.30

         
Interactors      
Q06604

PPPLPTRR

8.44

-7.90

-9.77

GPRMPSRG

9.66

-6.94

-8.81

KPLLPTRP

9.72

-6.98

-8.85

P24583

PLPPQPRK

11.37

-4.70

-6.57

LPPQPRKH

11.77

-7.67

-9.54

APLPPQPR

15.02

-4.24

-6.11

Q06625

LPPIPLPK

11.36

-6.41

-8.28

VLTLPPIP

13.23

-6.11

-7.98

PPIPLPKD

14.78

-1.63

-3.50

P19812

EPRPRRIP

12.05

-7.95

-9.82

PRPRRIPP

12.57

-1.90

-3.77

SPIFRPGN

12.99

-3.13

-5.00

P53182

SRRNPGKP

13.71

-3.36

-5.23

RRNPGKPP

15.67

-2.75

-4.62

P53169

MPTLPPRP

8.71

-8.60

-10.47

IMPTLPPR

12.64

-5.02

-6.89

VPIMPTLP

13.75

-6.12

-7.99

Q12043

APGRFPLQ

10.14

-6.16

-8.03

RFPLQPLP

11.11

-4.80

-6.67

NPSRFPMD

11.12

-4.10

-5.97

P40453

KPPDLPIR

8.51

-7.05

-8.92

PPDLPIRL

11.69

-7.07

-8.94

LRKRPPPP

11.92

-5.31

-7.18

P53971

CPFLPSSL

13.37

-4.16

-6.03

PFLPSSLK

14.30

-2.12

-3.99

HPGKCPPC

14.63

-3.67

-5.54

Q12168

PPPLPPRA

10.91

-6.80

-8.67

PPPVPNRP

11.83

-6.36

-8.23

DPYFPQFR

11.91

-6.82

-8.69

P27472

LSVPGSPR

13.43

-2.59

-4.46

PGSPRDLR

14.86

-2.46

-4.33

RPLSVPGS

14.97

-3.34

-5.21

P36006

KKPKNPGG

12.69

-4.12

-5.99

KPKNPGGL

14.18

-5.06

-6.93

QPKDPKFE

14.88

-3.41

-5.28

P32790

LPPIKPPR

9.66

-7.07

-8.94

PPIKPPRP

9.78

-7.37

-9.24

PPAMPARP

11.70

-5.72

-7.59

Q06440

TPKVEPSK

15.17

-4.21

-6.08

RTPKVEPS

15.35

-1.40

-3.27

Q06412

FFTKPPPP

12.72

-5.35

-7.22

NSPKSPRD

13.39

-1.75

-3.62

KERRPPPP

13.50

-5.63

-7.50

P34226

FVPVPPPQ

14.84

-5.00

-6.87

P36102

YPRIYPPP

12.37

-4.56

-6.43

LKYPRIYP

13.05

-3.09

-4.96

YDPFNAPI

15.11

-2.66

-4.53

P53933

PPPLPNRQ

10.19

-7.00

-8.87

RPPPPPIP

11.42

-6.55

-8.42

YPGNPTSR

12.70

-4.37

-6.24

Q04439

SKPKEPMF

13.39

-2.54

-4.41

KPKEPMFE

13.39

-4.05

-5.92

PPPPPSSK

13.61

-4.43

-6.30

Q12446

LPQLPNRN

8.53

-7.95

-9.82

APPPPPRR

9.52

-7.38

-9.25

IPEIPSTQ

11.45

-5.80

-7.67

P39969

VSPRRAPK

12.03

-1.89

-3.76

LPPQPGSK

12.55

-5.71

-7.58

PIPSPTRN

12.57

-4.81

-6.68

P37370

RPHMPSVR

7.38

-8.47

-10.34

MPKPRPFQ

10.13

-5.90

-7.77

SPISPSIN

12.02

-4.29

-6.16

P53739

FPQEPSPK

11.51

-4.93

-6.80

TPIMPSQN

12.39

-4.15

-6.02

RRRSPSTP

12.49

-4.12

-5.99

P40563

PSERPKRR

8.87

-7.18

-9.05

TPKVPERP

12.19

-7.19

-9.06

RRAPPPVP

12.97

-5.59

-7.46

P40325

QPPRPPRP

8.75

-9.03

-10.90

RPPRPAAN

10.14

-5.71

-7.58

RPPPRPQQ

10.96

-4.70

-6.57

Q04195

LPQNVPIR

10.03

-5.74

-7.61

EPIQFPFP

11.98

-3.71

-5.58

TPVLPTLP

13.74

-6.46

-8.33

Q07555

KVPKLPLP

10.73

-4.24

-6.11

LPLPASRP

11.57

-5.22

-7.09

PASRPSLN

11.65

-4.65

-6.52

Q05080

QKPDKPRP

11.07

-4.16

-6.03

LRQKPDKP

11.55

-5.62

-7.49

KPDKPRPI

13.41

-4.77

-6.64

 


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