ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-9.PDB
Scoring matrix: BBC1_1ZUK2-9_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 17.1
Foldx random average score for Saccharomyces cerevisiae: 13.504

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 986044
Proteins after disorder filtering: 3134
 Total fragments: 48380
Proteins after pattern filtering: 1524
 Total fragments: 9495
Proteins after MINT filtering: 28
 Total fragments: 530


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

17.10

-0.81

0.00

Best peptides

RRPIRPKM

0.00

-4.58

-3.77

         
Interactors      
Q06604

LLPTRPNK

8.30

-4.97

-4.16

LPTRPNKA

8.35

-9.56

-8.75

EKGPRMPS

9.85

-2.49

-1.68

P24583

LPPQPRKH

8.13

-8.76

-7.95

PPQPRKHD

10.59

-3.99

-3.18

NAPLPPQP

11.59

-4.89

-4.08

Q06625

LPPIPLPK

8.24

-7.78

-6.97

LTLPPIPL

10.90

-4.46

-3.65

SVGIPGTP

11.10

-5.95

-5.14

P19812

PRPRRIPP

6.56

-4.34

-3.53

EPRPRRIP

8.25

-5.99

-5.18

PRRIPPTD

9.77

-5.06

-4.25

P53182

SRRNPGKP

9.06

-5.46

-4.65

RRNPGKPP

10.92

-3.31

-2.50

P53169

MPTLPPRP

8.73

-9.66

-8.85

VPIMPTLP

10.70

-7.97

-7.16

SVPIMPTL

10.91

-4.07

-3.26

Q12043

FNPSRFPM

8.42

-3.33

-2.52

FPSTPLFE

9.84

-5.33

-4.52

RFPLQPLP

10.20

-6.07

-5.26

P40453

LRKRPPPP

6.73

-9.90

-9.09

KRPPPPPP

8.32

-6.15

-5.34

RKRPPPPP

9.09

-6.93

-6.12

P53971

EKACPFLP

8.80

-6.48

-5.67

NPDPNPLD

11.94

-4.16

-3.35

CPFLPSSL

12.06

-5.39

-4.58

Q12168

NRGPPPLP

8.13

-5.62

-4.81

PPPVPNRP

9.79

-9.42

-8.61

PVPNRPGG

11.12

-3.40

-2.59

P27472

PGSPRDLR

11.71

-4.18

-3.37

PLSVPGSP

11.90

-5.48

-4.67

P36006

NIPIPPPP

8.55

-6.47

-5.66

IPPPPPPM

9.75

-7.58

-6.77

KKPKNPGG

10.63

-5.16

-4.35

P32790

LPPIKPPR

8.13

-7.57

-6.76

IKPPRPTS

8.84

-4.39

-3.58

PPIKPPRP

9.77

-9.78

-8.97

Q06440

DRTPKVEP

11.70

-2.10

-1.29

RTPKVEPS

13.03

-4.81

-4.00

Q06412

RRPPPPPP

7.54

-6.86

-6.05

FFTKPPPP

9.16

-7.78

-6.97

RPPPPPPL

9.31

-7.20

-6.39

P34226

FVPVPPPQ

8.72

-7.77

-6.96

EDFVPVPP

10.52

-5.10

-4.29

PVPPPQLH

11.10

-6.22

-5.41

P36102

LKYPRIYP

6.19

-5.27

-4.46

YPRIYPPP

9.20

-8.09

-7.28

PRIYPPPH

9.70

-5.65

-4.84

P53933

RRPPPPPI

7.52

-6.49

-5.68

RRRPPPPP

7.85

-6.91

-6.10

RVAPPPLP

8.30

-7.40

-6.59

Q04439

KKPAPPPP

9.65

-6.26

-5.45

KPKEPMFE

10.37

-4.83

-4.02

IPPPPPPP

10.57

-7.16

-6.35

Q12446

NRPVPPPP

7.04

-6.55

-5.74

NRPLPQLP

8.10

-6.25

-5.44

PPPRRGPA

9.19

-4.99

-4.18

P39969

FKLLPPQP

8.75

-6.60

-5.79

VSPRRAPK

9.09

-3.35

-2.54

RRAPKPPS

9.17

-3.49

-2.68

P37370

VPQNRPHM

7.47

-6.06

-5.25

MPKPRPFQ

7.59

-4.86

-4.05

APPIPDIP

9.51

-7.54

-6.73

P53739

RRRSPSTP

9.04

-4.95

-4.14

RSPSTPIM

10.60

-3.18

-2.37

RRSPSTPI

10.69

-2.89

-2.08

P40563

RRAPPPVP

8.02

-6.82

-6.01

PPPVPKKP

8.30

-8.82

-8.01

TPKVPERP

10.07

-9.05

-8.24

P40325

RPPPRPQQ

7.88

-5.74

-4.93

QPPRPPRP

8.32

-13.10

-12.29

RPHQRPST

8.84

-4.72

-3.91

Q04195

STPVLPTL

10.88

-4.07

-3.26

EPIQFPFP

11.04

-7.17

-6.36

NEPIQFPF

11.36

-3.99

-3.18

Q07555

KVPKLPLP

7.76

-7.83

-7.02

KTKVPKLP

7.95

-6.96

-6.15

LPASRPSL

8.57

-4.51

-3.70

Q05080

LRQKPDKP

6.40

-8.10

-7.29

QKPDKPRP

9.71

-7.06

-6.25

KPDKPRPI

9.75

-7.56

-6.75

 


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