ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-21.PDB
Scoring matrix: BBC1_1ZUK2-21_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 14.77
Foldx random average score for Saccharomyces cerevisiae: 14.283

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 1185892
Proteins after disorder filtering: 2982
 Total fragments: 42437
Proteins after pattern filtering: 1091
 Total fragments: 2625
Proteins after MINT filtering: 23
 Total fragments: 87


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

14.77

-1.15

0.00

Best peptides

RRRIGRPTRW

0.00

-4.66

-3.51

         
Interactors      
Q06604

EKGPRMPSRG

8.92

-5.21

-4.06

PLLPTRPNKA

10.75

-4.17

-3.02

PTPPSPPAKR

13.19

-3.93

-2.78

P24583

PPQPRKHDKT

12.99

-2.69

-1.54

APLPPQPRKH

13.62

-4.81

-3.66

Q06625

GPKQGPVTVD

13.59

-2.69

-1.54

VGIPGTPRDG

13.89

-1.00

0.15

P19812

HSPIFRPGNI

11.27

-4.15

-3.00

NSPEASPSLA

14.16

-1.96

-0.81

Q12043

GVFPSTPLFE

11.40

-3.74

-2.59

PSPSTSPQRS

14.28

-3.00

-1.85

P40453

WKPPDLPIRL

10.86

-7.09

-5.94

TKVPEPPSWK

11.35

-3.68

-2.53

PDLPIRLRKR

11.81

-3.70

-2.55

Q12168

PNRPGGTTNR

10.80

-5.50

-4.35

NDDPYFPQFR

11.79

-2.27

-1.12

PPVPNRPGGT

13.31

-1.77

-0.62

P27472

LSVPGSPRDL

13.12

-1.01

0.14

P36006

PKNPGGLSGK

10.66

-3.03

-1.88

NKKPKNPGGL

10.82

-3.94

-2.79

MGQPKDPKFE

12.12

-2.87

-1.72

P32790

APAPLDPFKT

11.03

-3.36

-2.21

PPRPTSTTSV

12.82

-2.96

-1.81

IKPPRPTSTT

13.59

-3.01

-1.86

Q06412

PKSPRDSSKQ

9.48

-4.48

-3.33

PPPPLSTSRN

12.73

-6.08

-4.93

SPMVSPSSQS

13.94

-3.31

-2.16

P53971

KACPFLPSSL

12.06

-2.84

-1.69

PLDPNSCGQT

12.66

-2.96

-1.81

PFLPSSLKTC

12.86

-2.73

-1.58

P36102

NAPIFTPSST

11.55

-3.70

-2.55

P53933

VSYPGNPTSR

10.58

-2.82

-1.67

Q04439

PKEPMFEAAY

11.78

-3.57

-2.42

SSKPKEPMFE

12.12

-4.39

-3.24

PPPPGMQNKA

12.32

-3.71

-2.56

Q12446

RPLPQLPNRN

9.96

-5.91

-4.76

PQMPATSTSG

12.18

-3.28

-2.13

FPIPEIPSTQ

12.67

-1.66

-0.51

P39969

AQPPKSPLLN

11.09

-4.56

-3.41

LLPPQPGSKK

12.24

-4.88

-3.73

PKSPLLNNTR

12.75

-3.69

-2.54

P53739

PIMPSQNSNN

12.86

-2.49

-1.34

PSTPIMPSQN

13.53

-1.20

-0.05

P40563

NSQPQGPSDT

13.93

-0.63

0.52

P40325

YVQPGDPRLG

9.82

-4.47

-3.32

SRPHQRPSTM

11.74

-6.46

-5.31

LPWTYPPRFY

12.63

-4.27

-3.12

P37370

QNRPHMPSVR

10.54

-5.48

-4.33

RPSPISPSIN

12.01

-2.47

-1.32

KATPVPPTLA

12.15

-4.24

-3.09

Q07555

PLPASRPSLN

13.10

-3.49

-2.34

Q04195

PVLPTLPQNV

13.07

-1.76

-0.61

TLPQNVPIRT

13.08

-5.46

-4.31

PSEPIIINLD

13.96

-2.68

-1.53

 


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