ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-18.PDB
Scoring matrix: BBC1_1ZUK2-18_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 17.27
Foldx random average score for Saccharomyces cerevisiae: 16.226

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 1121839
Proteins after disorder filtering: 3140
 Total fragments: 69671
Proteins after pattern filtering: 1528
 Total fragments: 10347
Proteins after MINT filtering: 27
 Total fragments: 460


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

17.27

2.91

0.00

Best peptides

WPPIPPHRAR

0.00

-1.13

-4.04

         
Interactors      
Q06604

LLPTRPNKAE

7.99

-2.67

-5.58

KGPRMPSRGR

8.97

-5.32

-8.23

KPLLPTRPNK

9.13

-5.14

-8.05

P24583

LPPQPRKHDK

11.20

-4.16

-7.07

APLPPQPRKH

11.83

-5.72

-8.63

NAPLPPQPRK

12.21

-4.56

-7.47

Q06625

LPPIPLPKDA

10.38

-4.68

-7.59

VLTLPPIPLP

14.32

-3.78

-6.69

LTLPPIPLPK

15.52

-3.98

-6.89

P19812

HSPIFRPGNI

12.01

-1.73

-4.64

PQNPPPILQF

12.35

1.64

-1.27

APQNPPPILQ

12.87

-3.36

-6.27

P53169

IMPTLPPRPY

10.51

-6.24

-9.15

YSPAQPSASL

12.73

0.07

-2.84

SPAQPSASLT

14.06

-3.80

-6.71

Q12043

SPSTSPQRSK

7.21

-3.10

-6.01

LQPLPSPSST

9.82

-2.45

-5.36

FPSTPLFEKD

12.16

-4.07

-6.98

P40453

KPPDLPIRLR

6.43

-6.46

-9.37

RPPPPPPVSM

8.94

-4.96

-7.87

PPDLPIRLRK

9.48

-6.83

-9.74

P53971

CPFLPSSLKT

9.93

-6.42

-9.33

ACPFLPSSLK

12.67

-2.27

-5.18

PNPLDPNSCG

13.32

-3.62

-6.53

Q12168

PPPLPPRANV

9.54

-7.63

-10.54

GPPPLPPRAN

10.53

-5.19

-8.10

IPPPVPNRPG

13.08

-5.30

-8.21

P27472

RPLSVPGSPR

11.71

-5.34

-8.25

LSVPGSPRDL

13.85

0.55

-2.36

VPGSPRDLRS

14.05

-4.88

-7.79

P36006

KPKNPGGLSG

10.84

-2.30

-5.21

IPPPPPPMGQ

11.03

-4.22

-7.13

KKPKNPGGLS

13.78

-3.55

-6.46

P32790

LPPIKPPRPT

8.06

-9.13

-12.04

PAPLDPFKTG

12.33

-0.67

-3.58

EGPPPAMPAR

13.87

-2.22

-5.13

Q06440

DRTPKVEPSK

14.70

0.13

-2.78

Q06412

RPPPPPPLLY

9.17

-8.31

-11.22

KPPPPLSTSR

10.75

-3.44

-6.35

PMVSPSSQSR

10.97

-1.26

-4.17

P34226

FVPVPPPQLH

10.44

-5.94

-8.85

VPVPPPQLHL

12.86

-5.45

-8.36

TPTNSPSPGA

14.58

-2.10

-5.01

P36102

YDPFNAPIFT

13.26

-5.34

-8.25

PMQPPPIESS

13.62

0.26

-2.65

NAPIFTPSST

13.65

-1.01

-3.92

P53933

RPPPPPIPST

10.11

-4.36

-7.27

APPPLPNRQL

11.24

-2.97

-5.88

YNDLPMELPH

12.49

-7.28

-10.19

Q04439

APPPPGMQNK

10.82

-3.79

-6.70

PPPPPPPSSK

10.84

-4.71

-7.62

NNIPTPPQNR

12.08

-4.29

-7.20

Q12446

LPQLPNRNNR

7.53

-6.99

-9.90

PLPQLPNRNN

8.96

-5.38

-8.29

APPPPPRASR

9.72

-3.87

-6.78

P39969

FKLLPPQPGS

9.41

-5.70

-8.61

LPPQPGSKKG

9.65

-4.28

-7.19

SPIPSPTRNS

11.13

-4.52

-7.43

P37370

MPKPRPFQNK

8.95

-5.23

-8.14

RPHMPSVRPA

9.24

-8.19

-11.10

SPSINPPKQS

9.98

-3.30

-6.21

P53739

TPIMPSQNSN

11.59

-3.02

-5.93

FFPQEPSPKI

11.64

-3.01

-5.92

STPIMPSQNS

12.52

-1.15

-4.06

P40563

RRAPPPVPKK

11.08

-4.89

-7.80

KRRAPPPVPK

12.88

-4.60

-7.51

NPGQLPPSLE

13.84

-2.54

-5.45

P40325

LPWTYPPRFY

6.55

-7.95

-10.86

RPSTMPATSS

9.60

-2.13

-5.04

QPPRPPRPAA

11.91

-4.15

-7.06

Q04195

LPQNVPIRTN

10.10

-2.57

-5.48

LPTLPQNVPI

12.06

-7.32

-10.23

HPSEPIIINL

12.21

-0.81

-3.72

Q07555

VPKLPLPASR

8.50

-4.62

-7.53

LPASRPSLNL

9.09

-4.00

-6.91

KLPLPASRPS

11.79

-7.14

-10.05

Q05080

RQKPDKPRPI

13.08

-3.53

-6.44

PDKPRPIVGE

14.88

-0.68

-3.59

 


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