ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-16.PDB
Scoring matrix: BBC1_1ZUK2-16_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.93
Foldx random average score for Saccharomyces cerevisiae: 15.058

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2175611
Proteins after random average filtering: 5078
 Total fragments: 1083060
Proteins after disorder filtering: 3233
 Total fragments: 76264
Proteins after pattern filtering: 1571
 Total fragments: 10292
Proteins after MINT filtering: 28
 Total fragments: 462


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.93

0.81

0.00

Best peptides

WPPIRPHRH

0.00

-0.26

-1.07

         
Interactors      
Q06604

LLPTRPNKA

6.65

-4.37

-5.18

YSNIPSSKP

8.60

-3.92

-4.73

KGPRMPSRG

8.83

-3.23

-4.04

P24583

PLPPQPRKH

9.61

-3.32

-4.13

APLPPQPRK

10.73

-2.68

-3.49

NAPLPPQPR

11.67

-3.47

-4.28

Q06625

LPPIPLPKD

8.01

-2.57

-3.38

IPGTPRDGA

12.90

-3.26

-4.07

SVGIPGTPR

13.79

-2.64

-3.45

P19812

HSPIFRPGN

10.78

-1.08

-1.89

RPRRIPPTD

11.76

-2.09

-2.90

PRRIPPTDE

12.19

0.41

-0.40

P53182

SSRRNPGKP

13.06

-4.46

-5.27

P53169

IMPTLPPRP

9.52

-3.99

-4.80

MPTLPPRPY

10.58

-6.72

-7.53

SVPIMPTLP

13.27

-3.17

-3.98

Q12043

FPSTPLFEK

8.75

-2.33

-3.14

SPSTSPQRS

9.81

-2.24

-3.05

LQPLPSPSS

10.19

-3.11

-3.92

P40453

PPDLPIRLR

9.25

-3.16

-3.97

TPEIPPPLP

10.06

-5.82

-6.63

KVPEPPSWK

11.47

0.50

-0.31

P53971

CPFLPSSLK

7.51

-3.25

-4.06

PNPLDPNSC

8.33

-2.58

-3.39

NPLDPNSCG

12.90

-1.57

-2.38

Q12168

PPPLPPRAN

7.93

-7.11

-7.92

PPPVPNRPG

10.62

-3.48

-4.29

DPYFPQFRS

11.39

-1.89

-2.70

P27472

VPGSPRDLR

12.17

-1.51

-2.32

PLSVPGSPR

12.46

-3.40

-4.21

RPLSVPGSP

12.54

-2.10

-2.91

P36006

IPPPPPPMG

9.82

-4.12

-4.93

PPPMGQPKD

11.41

-2.73

-3.54

KPKNPGGLS

11.59

-1.98

-2.79

P32790

LPPIKPPRP

6.01

-8.62

-9.43

PAPLDPFKT

10.18

0.71

-0.10

APLDPFKTG

11.67

-0.90

-1.71

Q06440

RTPKVEPSK

13.46

-2.54

-3.35

Q06412

SPMVSPSSQ

11.16

-1.79

-2.60

FSPNSPKSP

11.38

-1.47

-2.28

FTKPPPPLS

12.95

-0.90

-1.71

P34226

VPVPPPQLH

10.30

-4.31

-5.12

TPTNSPSPG

12.04

-0.71

-1.52

LGSTPTNSP

14.77

-2.78

-3.59

P36102

YPRIYPPPH

6.37

-6.89

-7.70

DPFNAPIFT

10.27

2.16

1.35

PPMQPPPIE

12.96

0.96

0.15

P53933

PPPIPSTQK

8.25

-3.36

-4.17

APPPLPNRQ

10.67

-3.23

-4.04

YNDLPMELP

11.54

-3.78

-4.59

Q04439

APPPPGMQN

11.41

-1.95

-2.76

KKPAPPPPG

11.49

-2.31

-3.12

PPPPPPSSK

11.84

-4.13

-4.94

Q12446

APPPPPHRH

7.22

-6.91

-7.72

LPQLPNRNN

7.94

-5.46

-6.27

APPPPPRRG

7.99

-3.77

-4.58

P39969

FKLLPPQPG

7.61

-3.99

-4.80

LPPQPGSKK

7.75

-5.03

-5.84

LSPIPSPTR

8.12

-4.41

-5.22

P37370

SPSINPPKQ

7.86

-3.43

-4.24

RPHMPSVRP

8.02

-8.65

-9.46

APPIPGMGA

9.35

-4.17

-4.98

P53739

STPIMPSQN

10.67

1.33

0.52

FFPQEPSPK

10.99

-1.62

-2.43

SPPLSPTIP

11.61

-3.80

-4.61

P40563

RAPPPVPKK

11.23

-4.72

-5.53

PSERPKRRA

11.27

-4.07

-4.88

RRAPPPVPK

12.08

-3.09

-3.90

P40325

LPWTYPPRF

8.87

-7.06

-7.87

RPPPRPQQN

9.75

-2.32

-3.13

RPHQRPSTM

10.25

-3.97

-4.78

Q04195

LPQNVPIRT

8.17

-1.40

-2.21

LPTLPQNVP

10.41

-6.01

-6.82

HPSEPIIIN

11.23

-1.00

-1.81

Q07555

LPASRPSLN

7.98

-2.98

-3.79

KLPLPASRP

9.66

-5.47

-6.28

WKTKVPKLP

11.37

-5.42

-6.23

Q05080

PDKPRPIVG

12.69

-0.03

-0.84

LRQKPDKPR

12.69

-4.28

-5.09

RQKPDKPRP

14.10

-3.98

-4.79

 


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