ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-13.PDB
Scoring matrix: BBC1_1ZUK2-13_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 17.82
Foldx random average score for Saccharomyces cerevisiae: 12.884

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 954398
Proteins after disorder filtering: 3139
 Total fragments: 49545
Proteins after pattern filtering: 1464
 Total fragments: 7964
Proteins after MINT filtering: 28
 Total fragments: 408


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

17.82

1.50

0.00

Best peptides

RPRRHPFR

0.00

-6.38

-7.88

         
Interactors      
Q06604

LLPTRPNK

8.35

-4.75

-6.25

PPPLPTRR

8.77

-9.20

-10.70

SPPPLPTR

8.81

-2.92

-4.42

P24583

PLPPQPRK

9.89

-4.83

-6.33

PPQPRKHD

11.24

-4.09

-5.59

APLPPQPR

11.26

-4.16

-5.66

Q06625

LPPIPLPK

9.65

-5.23

-6.73

IPLPKDAP

10.35

-4.27

-5.77

VLTLPPIP

11.37

-6.40

-7.90

P19812

EPRPRRIP

7.88

-3.47

-4.97

SPIFRPGN

8.79

-4.35

-5.85

PRPRRIPP

9.76

-2.62

-4.12

P53182

RRNPGKPP

11.54

-3.16

-4.66

P53169

IMPTLPPR

8.92

-4.22

-5.72

MPTLPPRP

9.04

-10.27

-11.77

VPIMPTLP

10.13

-5.76

-7.26

Q12043

APGRFPLQ

6.33

-4.50

-6.00

NPSRFPMD

7.51

-1.86

-3.36

RFPLQPLP

7.81

-4.64

-6.14

P40453

KPPDLPIR

6.45

-5.43

-6.93

IPPPLPPK

7.90

-4.99

-6.49

LRKRPPPP

9.66

-4.75

-6.25

P53971

NPDPNPLD

10.09

-4.02

-5.52

PFLPSSLK

10.29

-2.71

-4.21

DPNPLDPN

11.02

-1.52

-3.02

Q12168

DPYFPQFR

7.15

-7.52

-9.02

GPPPLPPR

8.98

-3.83

-5.33

NRGPPPLP

10.40

-4.01

-5.51

P27472

PGSPRDLR

9.46

-2.74

-4.24

LSVPGSPR

11.16

-1.72

-3.22

P36006

IPPPPPPM

10.76

-5.39

-6.89

PPPPPPMG

10.79

-5.70

-7.20

IPIPPPPP

10.93

-5.76

-7.26

P32790

LPPIKPPR

7.89

-6.31

-7.81

PPPAMPAR

9.46

-3.45

-4.95

PPIKPPRP

10.29

-6.04

-7.54

Q06440

TPKVEPSK

11.00

-2.87

-4.37

Q06412

PPPPLLYS

9.69

-2.04

-3.54

PPPPPLLY

10.01

-5.08

-6.58

PPPPPPLL

10.13

-5.42

-6.92

P34226

FVPVPPPQ

11.23

-6.19

-7.69

PVPPPQLH

11.74

-5.06

-6.56

VPVPPPQL

11.93

-3.84

-5.34

P36102

LKYPRIYP

8.44

-4.33

-5.83

YPRIYPPP

8.66

-3.94

-5.44

YDPFNAPI

10.62

-2.01

-3.51

P53933

RPPPPPIP

7.91

-7.02

-8.52

APPPLPNR

8.79

-4.23

-5.73

RVAPPPLP

9.08

-5.81

-7.31

Q04439

KPKEPMFE

9.12

-5.76

-7.26

IPTPPQNR

9.46

-6.24

-7.74

APPPPGMQ

10.07

-5.38

-6.88

Q12446

VPPPPPMR

7.51

-7.22

-8.72

NPFPFPIP

8.04

-2.66

-4.16

APPPPPRR

8.29

-8.12

-9.62

P39969

VSPRRAPK

9.01

-1.27

-2.77

KPPSYPSP

9.23

-2.02

-3.52

PPKSPLLN

9.37

-3.95

-5.45

P37370

MPKPRPFQ

5.26

-7.89

-9.39

RPHMPSVR

7.26

-8.12

-9.62

APPPPPLP

9.71

-4.81

-6.31

P53739

FPQEPSPK

10.09

-4.86

-6.36

SPASPPLS

10.72

-3.87

-5.37

RRRSPSTP

10.83

-3.42

-4.92

P40563

PSERPKRR

9.05

-5.66

-7.16

RRAPPPVP

9.69

-5.38

-6.88

TPKVPERP

10.51

-6.63

-8.13

P40325

RPPPRPQQ

6.88

-4.43

-5.93

LPWTYPPR

7.11

-3.91

-5.41

RPPRPAAN

7.76

-5.69

-7.19

Q04195

EPIQFPFP

8.36

-3.47

-4.97

TPVLPTLP

10.40

-6.68

-8.18

VLPTLPQN

10.47

-2.16

-3.66

Q07555

KVPKLPLP

8.10

-4.73

-6.23

LPASRPSL

9.76

-3.80

-5.30

PASRPSLN

10.38

-3.33

-4.83

Q05080

PDKPRPIV

10.09

-2.20

-3.70

LRQKPDKP

10.92

-5.45

-6.95

KPDKPRPI

11.16

-4.64

-6.14

 


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