ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-11.PDB
Scoring matrix: BBC1_1ZUK2-11_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 13.07
Foldx random average score for Saccharomyces cerevisiae: 11.441

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2185767
Proteins after random average filtering: 5078
 Total fragments: 871379
Proteins after disorder filtering: 3270
 Total fragments: 62514
Proteins after pattern filtering: 1600
 Total fragments: 10314
Proteins after MINT filtering: 28
 Total fragments: 583


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

13.07

0.58

0.00

Best peptides

WPWIFRR

0.00

-4.22

-4.80

         
Interactors      
Q06604

GPRMPSR

6.85

-5.41

-6.00

KPTPPSP

6.91

-5.00

-5.59

KPLLPTR

7.91

-5.89

-6.47

P24583

APLPPQP

7.70

-4.73

-5.32

LPPQPRK

7.78

-7.35

-7.93

PPQPRKH

8.51

-5.34

-5.92

Q06625

LPPIPLP

5.96

-5.90

-6.49

IPGTPRD

7.06

-4.78

-5.37

LTLPPIP

9.55

-5.20

-5.79

P19812

HSPIFRP

5.52

-4.49

-5.08

PRRIPPT

7.20

-5.63

-6.21

PRPRRIP

8.20

-4.22

-4.80

P53182

RNPGKPP

10.52

-3.36

-3.94

P53169

MPTLPPR

6.93

-9.61

-10.20

PTLPPRP

7.41

-3.54

-4.13

VPIMPTL

7.92

-5.80

-6.38

Q12043

APGRFPL

7.00

-3.78

-4.37

FPSTPLF

7.13

-6.80

-7.38

PSTSPQR

8.28

-2.09

-2.67

P40453

TPEIPPP

6.52

-6.15

-6.74

RPPPPPP

7.07

-5.58

-6.17

KRPPPPP

7.63

-4.32

-4.91

P53971

NPDPNPL

8.42

-3.98

-4.56

KACPFLP

8.67

-2.49

-3.08

HPGKCPP

9.75

-4.75

-5.34

Q12168

PPPVPNR

5.50

-8.84

-9.43

DPYFPQF

6.58

-4.50

-5.09

PPVPNRP

6.77

-5.30

-5.88

P27472

VPGSPRD

8.14

-3.65

-4.23

RPLSVPG

9.79

-4.07

-4.66

PLSVPGS

10.46

-5.07

-5.66

P36006

NIPIPPP

6.01

-5.57

-6.16

IPPPPPP

6.66

-5.61

-6.20

IPIPPPP

6.95

-5.16

-5.75

P32790

PPIKPPR

5.82

-7.75

-8.34

LPPIKPP

6.31

-5.91

-6.50

PPAMPAR

6.63

-5.92

-6.50

Q06440

PKVEPSK

9.62

-3.24

-3.83

RTPKVEP

9.93

-3.56

-4.14

Q06412

RPPPPPP

7.07

-5.58

-6.17

PPPPPPL

7.61

-6.24

-6.83

RRPPPPP

8.13

-4.12

-4.71

P34226

FVPVPPP

7.42

-6.67

-7.25

PVPPPQL

8.07

-4.16

-4.75

STPTNSP

8.86

-2.14

-2.73

P36102

YPRIYPP

4.26

-4.43

-5.01

NAPIFTP

6.83

-2.72

-3.31

YDPFNAP

8.00

-2.96

-3.54

P53933

PPPIPST

5.91

-4.78

-5.37

RPPPPPI

7.36

-6.32

-6.91

RRPPPPP

8.13

-4.12

-4.71

Q04439

KPKEPMF

6.40

-6.02

-6.60

IPPPPPP

6.66

-5.61

-6.20

KPAPPPP

6.97

-6.12

-6.71

Q12446

PPPPPRR

4.69

-6.85

-7.43

IPEIPST

5.64

-5.34

-5.92

PPPPHRH

5.75

-6.60

-7.18

P39969

LSPIPSP

7.04

-4.81

-5.39

PIPSPTR

7.32

-4.61

-5.20

APKPPSY

7.47

-4.18

-4.76

P37370

MPKPRPF

4.80

-5.91

-6.50

MPSVRPA

5.97

-4.46

-5.04

APPIPGA

6.10

-4.48

-5.07

P53739

FPQEPSP

8.28

-5.12

-5.71

PPLSPTI

8.62

-2.59

-3.17

SPASPPL

8.63

-4.01

-4.59

P40563

TPNVPTR

7.01

-6.01

-6.59

PPPVPKK

7.55

-7.29

-7.88

PSERPKR

8.00

-4.69

-5.28

P40325

QPPRPPR

5.88

-7.60

-8.18

PPRPPRP

6.06

-6.48

-7.07

QPRPPPR

6.69

-6.74

-7.33

Q04195

EPIQFPF

6.68

-5.12

-5.71

PQNVPIR

7.62

-5.63

-6.21

PIQFPFP

8.72

-4.52

-5.10

Q07555

PASRPSL

8.76

-3.11

-3.69

SPQKVPT

9.28

-3.73

-4.31

KVPKLPL

9.67

-4.03

-4.62

Q05080

KPDKPRP

4.95

-6.56

-7.14

PDKPRPI

9.16

-2.39

-2.98

QKPDKPR

9.46

-3.59

-4.17

 


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