ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-7.PDB
Scoring matrix: BBC1_1TG0-7_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 14.54
Foldx random average score for Saccharomyces cerevisiae: 11.704

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 946648
Proteins after disorder filtering: 3158
 Total fragments: 59103
Proteins after pattern filtering: 1525
 Total fragments: 10282
Proteins after MINT filtering: 28
 Total fragments: 570


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAA

14.54

0.07

0.00

Best peptides

WRRRHPRR

0.00

-4.71

-4.78

         
Interactors      
Q06604

PPPLPTRR

5.26

-7.56

-7.63

KGPRMPSR

5.97

-3.99

-4.06

PPSPPAKR

6.17

-4.99

-5.06

P24583

PLPPQPRK

7.21

-3.49

-3.56

APLPPQPR

8.70

-3.53

-3.60

LPPQPRKH

9.02

-3.60

-3.67

Q06625

VLTLPPIP

7.66

-4.17

-4.24

VGIPGTPR

9.93

-3.16

-3.23

LPPIPLPK

10.13

-3.58

-3.65

P19812

PRPRRIPP

7.54

-2.29

-2.36

EPRPRRIP

7.81

-2.37

-2.44

PQNPPPIL

8.63

-3.54

-3.61

P53182

SRRNPGKP

9.65

-2.29

-2.36

P53169

MPTLPPRP

7.32

-5.09

-5.16

IMPTLPPR

7.73

-2.28

-2.35

VPIMPTLP

8.89

-2.62

-2.69

Q12043

APGRFPLQ

6.98

-3.19

-3.26

NPSRFPMD

8.07

-2.18

-2.25

SPSTSPQR

10.07

-0.72

-0.79

P40453

KPPDLPIR

7.08

-3.03

-3.10

VPEPPSWK

7.32

-4.09

-4.16

PPPLPPKI

7.46

-4.51

-4.58

P53971

CPFLPSSL

9.25

-2.32

-2.39

PLDPNSCG

9.56

-1.00

-1.07

NPDPNPLD

10.04

-1.26

-1.33

Q12168

PPPLPPRA

7.07

-5.27

-5.34

DPYFPQFR

7.63

-3.75

-3.82

PPPVPNRP

8.67

-4.44

-4.51

P27472

PGSPRDLR

7.70

-3.42

-3.49

PLSVPGSP

11.20

-2.41

-2.48

VPGSPRDL

11.24

-1.78

-1.85

P36006

PPPPPPMG

7.14

-5.11

-5.18

KKPKNPGG

8.04

-2.86

-2.93

IPPPPPPM

8.15

-3.30

-3.37

P32790

LPPIKPPR

7.27

-3.85

-3.92

PPIKPPRP

7.53

-4.73

-4.80

KPPRPTST

7.96

-2.88

-2.95

Q06440

DRTPKVEP

10.44

-0.41

-0.48

TPKVEPSK

10.73

-0.44

-0.51

Q06412

PNSPKSPR

7.77

-2.60

-2.67

PPPPPPLL

8.05

-4.39

-4.46

PPPPPLLY

8.19

-4.08

-4.15

P34226

VPVPPPQL

8.35

-3.82

-3.89

PVPPPQLH

8.55

-3.97

-4.04

FVPVPPPQ

8.58

-3.56

-3.63

P36102

PRIYPPPH

7.42

-4.37

-4.44

PMQPPPIE

8.55

-3.84

-3.91

YPRIYPPP

9.30

-2.84

-2.91

P53933

PPPLPNRQ

6.85

-5.44

-5.51

TRRRPPPP

7.53

-4.50

-4.57

VAPPPLPN

8.50

-2.78

-2.85

Q04439

IPTPPQNR

7.62

-3.43

-3.50

APPPPGMQ

8.07

-4.47

-4.54

KPAPPPPG

8.15

-3.79

-3.86

Q12446

VPPPPPMR

4.38

-6.11

-6.18

APPPPPRR

5.22

-6.06

-6.13

APPPPPHR

5.94

-5.00

-5.07

P39969

VSPRRAPK

6.45

-2.87

-2.94

QPPKSPLL

8.25

-2.65

-2.72

PIPSPTRN

8.61

-2.68

-2.75

P37370

MPKPRPFQ

5.91

-4.94

-5.01

PKPRPFQN

7.02

-3.69

-3.76

APPIPGMG

7.62

-3.94

-4.01

P53739

TPIMPSQN

9.00

-2.54

-2.61

PQEPSPKI

9.93

-1.45

-1.52

FPQEPSPK

9.93

-2.83

-2.90

P40563

PSERPKRR

4.62

-7.16

-7.23

PPPVPKKP

8.80

-3.51

-3.58

TPKVPERP

8.87

-3.72

-3.79

P40325

QPPRPPRP

6.23

-4.86

-4.93

SQPRPPPR

6.95

-4.46

-4.53

PPPRPQQN

7.23

-3.93

-4.00

Q04195

VLPTLPQN

9.38

-1.90

-1.97

EPIQFPFP

9.54

-0.97

-1.04

PQNVPIRT

9.58

-4.96

-5.03

Q07555

PASRPSLN

7.38

-4.14

-4.21

VPKLPLPA

8.76

-3.23

-3.30

KVPKLPLP

9.34

-2.80

-2.87

Q05080

PDKPRPIV

7.86

-2.21

-2.28

KPDKPRPI

8.20

-3.45

-3.52

QKPDKPRP

8.69

-2.07

-2.14

 


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