ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-23.PDB
Scoring matrix: BBC1_1TG0-23_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 10.53
Foldx random average score for Saccharomyces cerevisiae: 10.637

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2185767
Proteins after random average filtering: 5078
 Total fragments: 1253841
Proteins after disorder filtering: 3439
 Total fragments: 93565
Proteins after pattern filtering: 1526
 Total fragments: 6375
Proteins after MINT filtering: 28
 Total fragments: 270


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

10.53

-2.07

0.00

Best peptides

RPLMPRW

0.00

-4.97

-2.90

         
Interactors      
Q06604

LPTRPNK

6.84

-3.50

-1.43

GPRMPSR

7.12

-3.35

-1.28

KGPRMPS

7.16

-3.17

-1.10

P24583

LPPQPRK

4.91

-3.33

-1.26

Q06625

LPKDAPK

7.74

-1.07

1.00

GPKQGPV

8.92

-2.69

-0.62

PKQGPVT

9.14

-1.70

0.37

P19812

RPRRIPP

4.59

-6.11

-4.04

PRPRRIP

7.91

-3.59

-1.52

PIFRPGN

8.33

-2.27

-0.20

P53182

RNPGKPP

7.03

-5.01

-2.94

P53169

VPIMPTL

6.37

-4.74

-2.67

MPTLPPR

8.84

-1.73

0.34

YSPAQPS

8.97

-2.53

-0.46

Q12043

FPLQPLP

5.80

-5.33

-3.26

RFPLQPL

7.86

-3.24

-1.17

NPSRFPM

8.02

-2.97

-0.90

P40453

KVPEPPS

7.66

-1.79

0.28

KPPDLPI

8.31

-1.42

0.65

PSWKPPD

8.46

-1.74

0.33

P53971

PGKCPPC

8.31

-3.20

-1.13

NPLDPNS

8.86

-0.32

1.75

HPGKCPP

8.95

-4.01

-1.94

Q12168

VPNRPGG

8.44

-1.03

1.04

PVPKPNI

8.54

-2.21

-0.14

PPLPPRA

9.77

-2.71

-0.64

P27472

RPLSVPG

5.91

-5.98

-3.91

VPGSPRD

7.68

-1.47

0.60

SVPGSPR

9.98

-1.62

0.45

P36006

KPKNPGG

6.48

-2.53

-0.46

PPMGQPK

6.86

-3.70

-1.63

QPKDPKF

6.94

-2.59

-0.52

P32790

KPPRPTS

6.68

-3.41

-1.34

MPARPTA

6.90

-3.23

-1.16

APLDPFK

7.09

-2.06

0.01

Q06440

RTPKVEP

7.15

-5.60

-3.53

PKVEPSK

8.88

-2.11

-0.04

Q06412

SPKSPRD

5.94

-2.22

-0.15

FSPNSPK

8.20

-1.69

0.38

NSPKSPR

9.20

-2.73

-0.66

P34226

TPTNSPS

8.71

-0.88

1.19

P36102

KYPRIYP

6.59

-4.88

-2.81

PPMQPPP

7.52

-4.14

-2.07

PFNAPIF

8.10

-3.45

-1.38

P53933

LPMELPH

6.70

-3.51

-1.44

DLPMELP

9.46

-2.51

-0.44

YPGNPTS

9.54

-1.30

0.77

Q04439

KPKEPMF

3.57

-4.47

-2.40

KKPAPPP

7.17

-4.40

-2.33

SKPKEPM

8.15

-2.67

-0.60

Q12446

RLPAPPP

6.88

-4.99

-2.92

RGPAPPP

7.06

-6.13

-4.06

PPRRGPA

7.14

-2.65

-0.58

P39969

RAPKPPS

5.97

-3.38

-1.31

SPRRAPK

6.35

-2.91

-0.84

QPPKSPL

6.79

-3.96

-1.89

P37370

RPHMPSV

5.61

-5.70

-3.63

QMPKPRP

5.76

-3.54

-1.47

KVPQNRP

6.22

-4.04

-1.97

P53739

TPIMPSQ

6.88

-3.68

-1.61

FPQEPSP

7.32

-1.62

0.45

RSPSTPI

7.63

-4.36

-2.29

P40563

QPQGPSD

7.01

-1.59

0.48

TPAGTPN

7.62

-0.86

1.21

PSERPKR

8.36

-2.56

-0.49

P40325

RPPRPAA

5.80

-5.79

-3.72

RPHQRPS

5.98

-4.28

-2.21

RPQQNPS

6.21

-4.00

-1.93

Q04195

HPSEPII

7.31

-1.95

0.12

EPIQFPF

7.36

-3.28

-1.21

LPQNVPI

7.46

-1.52

0.55

Q07555

KVPKLPL

6.21

-4.05

-1.98

PLPASRP

7.71

-3.29

-1.22

PASRPSL

7.85

-2.44

-0.37

Q05080

KPDKPRP

3.00

-2.65

-0.58

QKPDKPR

10.45

-0.77

1.30

RQKPDKP

10.58

-3.76

-1.69

 


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