ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-2.PDB
Scoring matrix: BBC1_1TG0-2_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 21.13
Foldx random average score for Saccharomyces cerevisiae: 22.605

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 929235
Proteins after disorder filtering: 3146
 Total fragments: 77759
Proteins after pattern filtering: 1578
 Total fragments: 13441
Proteins after MINT filtering: 28
 Total fragments: 658


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

21.13

0.04

0.00

Best peptides

RWKFRPPRRW

0.00

-7.48

-7.52

         
Interactors      
Q06604

RYSNIPSSKP

11.99

-8.41

-8.45

RVKPAPPVSR

14.48

-5.42

-5.46

TMKNKPKPTP

14.71

-6.47

-6.51

P24583

NAPLPPQPRK

13.74

-5.79

-5.83

ANAPLPPQPR

15.17

-7.68

-7.72

ERANAPLPPQ

17.18

-6.51

-6.55

Q06625

GSVGIPGTPR

17.08

-5.42

-5.46

TLPPIPLPKD

17.11

-4.16

-4.20

GVLTLPPIPL

17.57

-5.32

-5.36

P19812

RPRRIPPTDE

16.08

-10.52

-10.56

PQNPPPILQF

16.36

-3.50

-3.54

AKTSPSNSPE

16.71

-3.64

-3.68

P53182

SSRRNPGKPP

14.45

-6.22

-6.26

KSSRRNPGKP

15.52

-3.69

-3.73

P53169

IMPTLPPRPY

17.49

-5.91

-5.95

SVPIMPTLPP

17.55

-5.47

-5.51

YSPAQPSASL

17.80

-4.08

-4.12

Q12043

RFPLQPLPSP

11.33

-7.81

-7.85

NTLFNPSRFP

13.98

-5.97

-6.01

NKTAAPGRFP

14.31

-5.07

-5.11

P40453

RLRKRPPPPP

6.85

-10.57

-10.61

RKRPPPPPPV

10.93

-8.38

-8.42

LRKRPPPPPP

13.63

-7.99

-8.03

P53971

QRKCHPGKCP

11.33

-7.79

-7.83

RKCHPGKCPP

12.48

-10.30

-10.34

GKVVNPDPNP

13.96

-5.08

-5.12

Q12168

NKVQHPVPKP

12.08

-6.44

-6.48

NRGPPPLPPR

13.03

-7.31

-7.35

PLPPRANVQP

16.68

-5.90

-5.94

P27472

RPLSVPGSPR

16.59

-9.43

-9.47

PLSVPGSPRD

18.64

-2.85

-2.89

SVPGSPRDLR

19.04

-5.59

-5.63

P36006

ANIPIPPPPP

15.76

-7.81

-7.85

NKKPKNPGGL

16.25

-4.02

-4.06

GQPKDPKFEA

16.78

-5.25

-5.29

P32790

SSAPAPLDPF

16.61

-3.83

-3.87

GGTTVPAAPV

19.44

-4.26

-4.30

LPPIKPPRPT

19.62

-5.94

-5.98

Q06440

KKDRTPKVEP

13.97

-6.33

-6.37

Q06412

RRPPPPPPLL

12.32

-9.05

-9.09

FFTKPPPPLS

13.20

-8.62

-8.66

FSPNSPKSPR

13.97

-6.92

-6.96

P34226

SLGSTPTNSP

15.09

-5.52

-5.56

FVPVPPPQLH

15.41

-9.35

-9.39

DFVPVPPPQL

16.92

-4.90

-4.94

P36102

ANNVPPPMQP

15.29

-7.40

-7.44

NNVPPPMQPP

16.25

-6.80

-6.84

NYDPFNAPIF

16.44

-2.91

-2.95

P53933

RTRRRPPPPP

8.96

-10.74

-10.78

RRRPPPPPIP

9.42

-10.85

-10.89

TRRRPPPPPI

12.36

-7.97

-8.01

Q04439

RHSKKPAPPP

8.27

-8.94

-8.98

RQANIPPPPP

11.47

-8.76

-8.80

HSKKPAPPPP

12.82

-8.14

-8.18

Q12446

RLPAPPPPPR

9.93

-9.68

-9.72

RRGPAPPPPP

10.61

-10.01

-10.05

NRNNRPVPPP

12.04

-8.20

-8.24

P39969

RRAPKPPSYP

10.56

-9.59

-9.63

ARSSSPEENP

13.78

-7.18

-7.22

CFKLLPPQPG

14.33

-6.80

-6.84

P37370

NRPHMPSVRP

10.63

-6.21

-6.25

GHVPPPPVPP

13.51

-8.69

-8.73

THVSNPPQAP

13.81

-5.70

-5.74

P53739

RRRSPSTPIM

11.63

-7.05

-7.09

RSPSTPIMPS

12.09

-4.93

-4.97

FFPQEPSPKI

12.69

-6.66

-6.70

P40563

RRAPPPVPKK

10.86

-8.01

-8.05

PKRRAPPPVP

12.60

-6.85

-6.89

KRRAPPPVPK

15.14

-9.41

-9.45

P40325

GHQSRPHQRP

9.80

-7.90

-7.94

SQPRPPPRPQ

11.22

-8.89

-8.93

HQSRPHQRPS

12.06

-5.69

-5.73

Q04195

RQNSTPVLPT

11.25

-6.06

-6.10

CSSSHPSEPI

15.12

-4.52

-4.56

HCSSSHPSEP

15.34

-6.03

-6.07

Q07555

WKTKVPKLPL

12.39

-6.35

-6.39

PKLPLPASRP

14.59

-4.99

-5.03

SLNLSPQKVP

15.58

-7.16

-7.20

Q05080

QKPDKPRPIV

11.94

-6.73

-6.77

RQKPDKPRPI

14.62

-5.78

-5.82

LRQKPDKPRP

17.76

-6.39

-6.43

 


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