ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-18.PDB
Scoring matrix: BBC1_1TG0-18_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 30.57
Foldx random average score for Saccharomyces cerevisiae: 28.888

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 1036989
Proteins after disorder filtering: 3160
 Total fragments: 76332
Proteins after pattern filtering: 1489
 Total fragments: 8524
Proteins after MINT filtering: 27
 Total fragments: 333


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

30.57

9.06

0.00

Best peptides

RPFISNRRGR

0.00

-4.25

-13.31

         
Interactors      
Q06604

PPPLPTRRDH

12.88

-2.82

-11.88

KGPRMPSRGR

14.89

-4.72

-13.78

KPLLPTRPNK

17.14

-5.05

-14.11

P24583

APLPPQPRKH

20.69

-2.23

-11.29

LPPQPRKHDK

21.73

-2.16

-11.22

PLPPQPRKHD

27.29

-1.60

-10.66

Q06625

VGIPGTPRDG

21.71

3.68

-5.38

LPPIPLPKDA

24.44

0.93

-8.13

GIPGTPRDGA

27.49

-0.51

-9.57

P19812

DHSPIFRPGN

24.69

-1.30

-10.36

PQNPPPILQF

26.47

1.62

-7.44

TSPSNSPEAS

26.93

3.02

-6.04

P53182

KSSRRNPGKP

25.42

-1.36

-10.42

P53169

IMPTLPPRPY

21.08

-1.96

-11.02

VPIMPTLPPR

23.35

-2.85

-11.91

YSPAQPSASL

28.74

1.26

-7.80

Q12043

SPSTSPQRSK

15.54

-0.41

-9.47

SPSPSTSPQR

21.47

1.04

-8.02

LQPLPSPSST

23.34

0.82

-8.24

P40453

PPDLPIRLRK

21.64

-2.97

-12.03

PDLPIRLRKR

22.50

1.90

-7.16

RPPPPPPVSM

24.61

-0.06

-9.12

P53971

NPLDPNSCGQ

19.61

-0.79

-9.85

CPFLPSSLKT

22.10

-3.39

-12.45

PNPLDPNSCG

27.20

-0.45

-9.51

Q12168

PPPVPNRPGG

15.44

-3.75

-12.81

GPPPLPPRAN

20.89

-2.15

-11.21

PPPLPPRANV

23.90

-3.99

-13.05

P27472

LSVPGSPRDL

23.65

1.36

-7.70

PGSPRDLRSN

24.35

1.02

-8.04

VPGSPRDLRS

26.36

-1.59

-10.65

P36006

NKKPKNPGGL

21.63

-0.32

-9.38

IPPPPPPMGQ

22.87

-3.66

-12.72

KPKNPGGLSG

23.84

0.73

-8.33

P32790

LPPIKPPRPT

20.08

-5.77

-14.83

APLDPFKTGG

24.32

-1.14

-10.20

PPPAMPARPT

25.20

-1.96

-11.02

Q06412

NSPKSPRDSS

24.25

1.27

-7.79

PMVSPSSQSR

24.49

2.07

-6.99

KPPPPLSTSR

24.53

-0.78

-9.84

P34226

TPTNSPSPGA

24.27

-0.81

-9.87

LGSTPTNSPS

25.87

1.28

-7.78

VPVPPPQLHL

28.31

-2.21

-11.27

P36102

NAPIFTPSST

23.70

0.78

-8.28

YDPFNAPIFT

26.49

-3.04

-12.10

PIFTPSSTSS

26.94

2.05

-7.01

P53933

APPPLPNRQL

20.22

-1.28

-10.34

VSYPGNPTSR

22.82

2.88

-6.18

RPPPPPIPST

25.05

-0.64

-9.70

Q04439

IPTPPQNRDV

23.03

2.08

-6.98

NNNIPTPPQN

23.28

-0.76

-9.82

KKPAPPPPGM

24.72

-1.82

-10.88

Q12446

LPQLPNRNNR

15.03

-6.03

-15.09

APPPPPRRGP

17.52

-4.50

-13.56

LPPLPNQFAP

19.44

-2.70

-11.76

P39969

FKLLPPQPGS

21.02

-3.18

-12.24

SPIPSPTRNS

21.78

-1.63

-10.69

PIPSPTRNSV

22.38

1.58

-7.48

P37370

RPHMPSVRPA

18.45

-4.35

-13.41

APPIPTSHAP

19.19

-2.50

-11.56

APPLPNTTSV

19.89

-1.16

-10.22

P53739

RRSPSTPIMP

22.39

0.07

-8.99

TPIMPSQNSN

23.66

-0.18

-9.24

FFPQEPSPKI

26.55

-1.54

-10.60

P40563

PSERPKRRAP

20.14

-0.69

-9.75

NSEPPTPAGT

23.51

0.88

-8.18

MEVNSQPQGP

25.83

-1.07

-10.13

P40325

LPWTYPPRFY

17.76

-4.99

-14.05

HQSRPHQRPS

22.05

-0.75

-9.81

QPPRPPRPAA

22.66

-1.48

-10.54

Q04195

TPVLPTLPQN

21.88

-1.04

-10.10

APPPTNPDAS

23.71

2.37

-6.69

ENSVPNPPNT

24.07

-0.42

-9.48

Q07555

KLPLPASRPS

20.74

-3.00

-12.06

VPKLPLPASR

22.35

-1.12

-10.18

LPLPASRPSL

23.61

-0.91

-9.97

Q05080

RQKPDKPRPI

23.15

-0.83

-9.89

PDKPRPIVGE

27.23

-0.39

-9.45

KPDKPRPIVG

28.32

1.96

-7.10

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER