ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-17.PDB
Scoring matrix: BBC1_1TG0-17_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.8
Foldx random average score for Saccharomyces cerevisiae: 20.150

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2175611
Proteins after random average filtering: 5078
 Total fragments: 935733
Proteins after disorder filtering: 3127
 Total fragments: 51033
Proteins after pattern filtering: 1402
 Total fragments: 5536
Proteins after MINT filtering: 27
 Total fragments: 212


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

17.80

3.43

0.00

Best peptides

WRWRRGYFR

0.00

0.38

-3.05

         
Interactors      
Q06604

EKGPRMPSR

13.64

-0.75

-4.18

LPTRPNKAE

15.25

-0.70

-4.13

PLLPTRPNK

15.46

-1.25

-4.68

P24583

APLPPQPRK

14.02

-3.14

-6.57

LPPQPRKHD

14.24

-2.66

-6.09

PPQPRKHDK

16.74

-0.88

-4.31

Q06625

IPLPKDAPK

16.17

-2.02

-5.45

SVGIPGTPR

16.88

1.46

-1.97

GGPKQGPVT

17.17

0.82

-2.61

P19812

PIFRPGNIF

10.49

-2.64

-6.07

PRPRRIPPT

16.21

2.27

-1.16

EPRPRRIPP

20.11

-5.01

-8.44

P53169

SPAQPSASL

20.03

-0.32

-3.75

Q12043

KTAAPGRFP

14.12

-1.14

-4.57

LFNPSRFPM

17.14

-0.86

-4.29

GVFPSTPLF

17.68

0.97

-2.46

P40453

DCPRCGPTA

14.79

1.28

-2.15

PDLPIRLRK

14.86

-1.21

-4.64

WKPPDLPIR

14.96

-1.93

-5.36

P53971

RKCHPGKCP

16.90

-2.59

-6.02

CPFLPSSLK

17.11

-2.28

-5.71

DPNPLDPNS

17.28

1.34

-2.09

Q12168

VPNRPGGTT

12.77

-0.97

-4.40

PNRPGGTTN

14.59

1.55

-1.88

PPLPPRANV

14.86

-3.44

-6.87

P27472

PLSVPGSPR

14.00

0.68

-2.75

VPGSPRDLR

16.34

-3.30

-6.73

LSVPGSPRD

18.27

0.79

-2.64

P36006

PPPPMGQPK

13.11

-1.90

-5.33

KPKNPGGLS

13.63

-2.27

-5.70

PKNPGGLSG

14.11

1.38

-2.05

P32790

APAPLDPFK

13.45

0.19

-3.24

GPPPAMPAR

16.47

-1.62

-5.05

KPPRPTSTT

16.84

-1.19

-4.62

Q06440

RTPKVEPSK

15.62

2.14

-1.29

DRTPKVEPS

19.97

2.99

-0.44

Q06412

PKSPRDSSK

16.30

1.85

-1.58

PPPPLSTSR

16.98

-1.32

-4.75

PPPPPLLYS

18.01

-0.36

-3.79

P34226

PVPPPQLHL

16.91

-2.64

-6.07

P36102

YDPFNAPIF

17.08

-1.66

-5.09

NYDPFNAPI

17.99

1.01

-2.42

LKYPRIYPP

19.30

-0.71

-4.14

P53933

VAPPPLPNR

16.05

-2.70

-6.13

NDLPMELPH

17.77

1.86

-1.57

VSYPGNPTS

18.10

1.65

-1.78

Q04439

APPPPGMQN

13.26

-1.31

-4.74

PPPPGMQNK

13.83

-2.64

-6.07

SSKPKEPMF

16.92

0.61

-2.82

Q12446

PPPPPHRHV

12.78

-4.24

-7.67

RPLPQLPNR

14.35

-3.47

-6.90

LPPLPNQFA

14.49

-2.69

-6.12

P39969

LPPQPGSKK

8.18

-3.43

-6.86

YPSPAQPPK

16.04

-2.74

-6.17

PPQPGSKKG

16.66

-0.79

-4.22

P37370

PPPPPGAFS

10.48

-1.07

-4.50

KVPQNRPHM

11.91

-3.51

-6.94

QMPKPRPFQ

12.29

-1.54

-4.97

P53739

RRSPSTPIM

15.12

0.15

-3.28

FPQEPSPKI

15.30

-2.58

-6.01

RRRSPSTPI

18.04

-0.04

-3.47

P40563

RAPPPVPKK

14.65

-1.88

-5.31

PPTPAGTPN

16.00

0.76

-2.67

PTPAGTPNV

16.63

1.13

-2.30

P40325

LYVQPGDPR

10.94

-1.66

-5.09

RPPRPAANL

15.29

-3.39

-6.82

QSQPPRPPR

15.49

-3.94

-7.37

Q04195

TLPQNVPIR

16.14

-0.25

-3.68

VPNPPNTAT

17.28

-0.41

-3.84

ENSVPNPPN

18.71

1.75

-1.68

Q07555

LPLPASRPS

17.75

-1.01

-4.44

PASRPSLNL

18.21

-0.27

-3.70

LSPQKVPTG

19.82

2.04

-1.39

Q05080

KPDKPRPIV

12.47

-3.71

-7.14

LRQKPDKPR

13.85

-0.50

-3.93

 


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