ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-16.PDB
Scoring matrix: BBC1_1TG0-16_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.52
Foldx random average score for Saccharomyces cerevisiae: 18.929

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2175611
Proteins after random average filtering: 5078
 Total fragments: 1080029
Proteins after disorder filtering: 3226
 Total fragments: 80104
Proteins after pattern filtering: 1517
 Total fragments: 8195
Proteins after MINT filtering: 28
 Total fragments: 350


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.52

7.48

0.00

Best peptides

FPHLSSRRA

0.00

-0.51

-7.99

         
Interactors      
Q06604

LLPTRPNKA

10.41

0.13

-7.35

GPRMPSRGR

11.29

-1.57

-9.05

KPTPPSPPA

12.76

-0.88

-8.36

P24583

LPPQPRKHD

15.78

-0.56

-8.04

APLPPQPRK

16.28

1.09

-6.39

NAPLPPQPR

17.86

0.92

-6.56

Q06625

IPGTPRDGA

12.50

-1.15

-8.63

LPPIPLPKD

14.01

-1.19

-8.67

SVGIPGTPR

16.06

1.92

-5.56

P19812

TSPSNSPEA

13.14

3.30

-4.18

SPEASPSLA

14.31

0.89

-6.59

PIFRPGNIF

14.34

1.58

-5.90

P53182

SRRNPGKPP

17.74

0.82

-6.66

P53169

MPTLPPRPY

13.34

-1.57

-9.05

IMPTLPPRP

16.18

-2.12

-9.60

VPIMPTLPP

18.84

-0.96

-8.44

Q12043

LQPLPSPSS

12.24

0.27

-7.21

SPSTSPQRS

13.39

1.29

-6.19

PLPSPSSTF

13.77

2.02

-5.46

P40453

DCPRCGPTA

11.85

0.34

-7.14

PPDLPIRLR

12.50

-3.66

-11.14

WKPPDLPIR

15.34

0.76

-6.72

P53971

CPFLPSSLK

12.91

-0.24

-7.72

RKCHPGKCP

15.05

-0.05

-7.53

NPLDPNSCG

17.37

0.10

-7.38

Q12168

DPYFPQFRS

13.26

0.63

-6.85

GPPPLPPRA

13.79

-0.70

-8.18

PPPLPPRAN

15.22

-3.40

-10.88

P27472

VPGSPRDLR

14.60

0.46

-7.02

PLSVPGSPR

14.94

1.21

-6.27

LSVPGSPRD

17.44

2.35

-5.13

P36006

QPKDPKFEA

13.24

0.77

-6.71

KPKNPGGLS

13.47

0.91

-6.57

PKDPKFEAA

16.11

2.61

-4.87

P32790

LPPIKPPRP

13.43

-4.38

-11.86

VPAAPVSSA

14.44

-0.15

-7.63

APLDPFKTG

16.75

0.86

-6.62

Q06440

KDRTPKVEP

17.86

-1.05

-8.53

RTPKVEPSK

18.92

1.63

-5.85

Q06412

PPPPLSTSR

15.55

0.26

-7.22

GFSPNSPKS

16.00

3.56

-3.92

SPMVSPSSQ

16.14

0.58

-6.90

P34226

PTNSPSPGA

15.54

2.64

-4.84

VPVPPPQLH

17.71

0.04

-7.44

STPTNSPSP

18.02

3.20

-4.28

P36102

YDPFNAPIF

13.46

1.06

-6.42

YPRIYPPPH

14.93

-2.81

-10.29

NLKYPRIYP

16.47

3.33

-4.15

P53933

PPPIPSTQK

14.14

0.46

-7.02

YNDLPMELP

14.75

-2.22

-9.70

APPPLPNRQ

16.66

1.84

-5.64

Q04439

KPKEPMFEA

12.13

0.17

-7.31

APPPPGMQN

15.42

-1.21

-8.69

ARPSPPTAA

15.60

1.29

-6.19

Q12446

LPPLPNQFA

7.79

-2.26

-9.74

LPQLPNRNN

11.75

-3.18

-10.66

IPEIPSTQS

12.95

-1.19

-8.67

P39969

LSPIPSPTR

11.41

-0.05

-7.53

LPPQPGSKK

12.67

-0.13

-7.61

QPPKSPLLN

15.09

-3.04

-10.52

P37370

RPHMPSVRP

8.32

-3.78

-11.26

IPDIPSSAA

8.64

-1.57

-9.05

VPSIPSSSA

8.64

-1.66

-9.14

P53739

TPIMPSQNS

13.68

-0.52

-8.00

RRSPSTPIM

15.27

0.43

-7.05

SPPLSPTIP

16.77

-1.39

-8.87

P40563

PSERPKRRA

9.76

-1.50

-8.98

EPPTPAGTP

16.71

-0.25

-7.73

GMVNPGQLP

16.77

2.57

-4.91

P40325

LPWTYPPRF

11.33

-1.64

-9.12

RPHQRPSTM

13.08

-3.22

-10.70

QPPRPPRPA

13.12

-1.48

-8.96

Q04195

LPTLPQNVP

14.56

-2.52

-10.00

TLPQNVPIR

14.84

1.59

-5.89

APPPTNPDA

16.20

1.46

-6.02

Q07555

KLPLPASRP

12.29

-1.86

-9.34

VPKLPLPAS

14.82

0.03

-7.45

LPASRPSLN

15.86

-2.28

-9.76

Q05080

LRQKPDKPR

13.90

-0.75

-8.23

RQKPDKPRP

15.82

-0.79

-8.27

 


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