ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-15.PDB
Scoring matrix: BBC1_1TG0-15_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 16.48
Foldx random average score for Saccharomyces cerevisiae: 12.513

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2175611
Proteins after random average filtering: 5078
 Total fragments: 925229
Proteins after disorder filtering: 2767
 Total fragments: 25754
Proteins after pattern filtering: 1143
 Total fragments: 3895
Proteins after MINT filtering: 27
 Total fragments: 190


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

16.48

1.01

0.00

Best peptides

RPFIIRKVM

0.00

-5.00

-6.01

         
Interactors      
Q06604

PLLPTRPNK

7.94

-3.05

-4.06

PPLPTRRDH

8.37

-4.12

-5.13

PRMPSRGRP

9.00

-3.65

-4.66

P24583

LPPQPRKHD

7.31

-4.96

-5.97

PPQPRKHDK

11.62

-3.20

-4.21

Q06625

IPGTPRDGA

6.98

-4.43

-5.44

LPPIPLPKD

8.99

-4.89

-5.90

PIPLPKDAP

11.38

-3.93

-4.94

P19812

HSPIFRPGN

7.00

-2.78

-3.79

RPRRIPPTD

9.18

-2.46

-3.47

EPRPRRIPP

10.02

-3.70

-4.71

P53169

NSVPIMPTL

10.63

-1.19

-2.20

MPTLPPRPY

10.82

-6.00

-7.01

IMPTLPPRP

11.96

-3.57

-4.58

Q12043

LFNPSRFPM

7.97

-3.67

-4.68

FPSTPLFEK

9.83

-4.13

-5.14

NPSRFPMDA

10.25

-2.75

-3.76

P40453

PDLPIRLRK

6.73

-3.77

-4.78

PPDLPIRLR

9.65

-6.85

-7.86

WKPPDLPIR

9.68

-4.36

-5.37

P53971

CPFLPSSLK

10.04

-4.20

-5.21

HPGKCPPCL

10.97

-2.28

-3.29

EKACPFLPS

12.46

-1.69

-2.70

Q12168

QHPVPKPNI

8.73

-3.75

-4.76

PPVPNRPGG

9.65

-3.75

-4.76

PPLPPRANV

10.06

-4.14

-5.15

P27472

VPGSPRDLR

7.29

-5.21

-6.22

P36006

KKPKNPGGL

10.98

-2.25

-3.26

PKDPKFEAA

11.96

-3.45

-4.46

QPKDPKFEA

12.44

-2.35

-3.36

P32790

LPPIKPPRP

9.27

-6.57

-7.58

PAMPARPTA

9.78

-1.31

-2.32

PIKPPRPTS

9.95

-2.43

-3.44

Q06440

RTPKVEPSK

10.99

-2.98

-3.99

KDRTPKVEP

11.97

-2.19

-3.20

Q06412

SPKSPRDSS

10.05

-1.67

-2.68

RPPPPPPLL

10.88

-4.20

-5.21

PKLPPLNTR

11.46

-3.18

-4.19

P34226

FVPVPPPQL

10.87

-4.56

-5.57

P36102

NLKYPRIYP

8.20

-2.93

-3.94

YPRIYPPPH

10.84

-5.52

-6.53

KYPRIYPPP

11.37

-3.02

-4.03

P53933

PPLPNRQLP

9.50

-3.43

-4.44

PPPIPSTQK

10.72

-4.63

-5.64

PPPLPNRQL

11.20

-5.15

-6.16

Q04439

PSSKPKEPM

11.25

-1.36

-2.37

KPKEPMFEA

11.39

-3.71

-4.72

NIPTPPQNR

11.66

-3.36

-4.37

Q12446

PPPPPRASR

7.63

-6.15

-7.16

PQLPNRNNR

8.81

-4.35

-5.36

PPPPPRRGP

9.65

-4.73

-5.74

P39969

LSPIPSPTR

10.06

-3.40

-4.41

RRAPKPPSY

11.28

-2.16

-3.17

QPPKSPLLN

11.40

-2.93

-3.94

P37370

KVPQNRPHM

6.48

-5.06

-6.07

QMPKPRPFQ

6.65

-3.92

-4.93

PKPRPFQNK

8.62

-4.59

-5.60

P53739

RRSPSTPIM

10.57

-2.86

-3.87

FPQEPSPKI

11.46

-2.62

-3.63

SPPLSPTIP

11.93

-4.01

-5.02

P40563

PSERPKRRA

9.56

-3.35

-4.36

PPPVPKKPS

11.38

-4.17

-5.18

NPGQLPPSL

12.03

-2.23

-3.24

P40325

PPRPPRPAA

8.72

-3.78

-4.79

PRPPPRPQQ

9.05

-3.62

-4.63

RPPRPAANL

9.10

-5.05

-6.06

Q04195

NEPIQFPFP

9.94

-5.26

-6.27

LPTLPQNVP

11.09

-5.31

-6.32

NSTPVLPTL

11.40

-0.54

-1.55

Q07555

PLPASRPSL

8.55

-2.91

-3.92

WKTKVPKLP

10.14

-2.68

-3.69

VPKLPLPAS

10.59

-4.63

-5.64

Q05080

KPDKPRPIV

6.99

-4.19

-5.20

RQKPDKPRP

11.47

-3.76

-4.77

 


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