ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-14.PDB
Scoring matrix: BBC1_1TG0-14_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 16.17
Foldx random average score for Saccharomyces cerevisiae: 13.467

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2175611
Proteins after random average filtering: 5078
 Total fragments: 1066933
Proteins after disorder filtering: 2987
 Total fragments: 39022
Proteins after pattern filtering: 1351
 Total fragments: 5724
Proteins after MINT filtering: 27
 Total fragments: 295


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

16.17

0.63

0.00

Best peptides

RPPRIRRKK

0.00

-4.13

-4.76

         
Interactors      
Q06604

PLLPTRPNK

8.31

-2.10

-2.73

PPLPTRRDH

9.06

-3.67

-4.30

TPPSPPAKR

10.38

-3.38

-4.01

P24583

LPPQPRKHD

8.48

-2.79

-3.42

PPQPRKHDK

9.84

-3.14

-3.77

APLPPQPRK

10.41

-4.11

-4.74

Q06625

LPPIPLPKD

8.60

-3.68

-4.31

IPGTPRDGA

9.62

-4.19

-4.82

VLTLPPIPL

11.57

-2.31

-2.94

P19812

HSPIFRPGN

8.58

-2.62

-3.25

PIFRPGNIF

9.86

-1.57

-2.20

RPRRIPPTD

10.30

-1.76

-2.39

P53169

MPTLPPRPY

9.70

-3.85

-4.48

NSVPIMPTL

11.80

-0.91

-1.54

PIMPTLPPR

11.91

-3.70

-4.33

Q12043

FPSTPLFEK

9.43

-2.01

-2.64

LFNPSRFPM

11.13

-3.10

-3.73

NPSRFPMDA

11.17

-2.28

-2.91

P40453

PPDLPIRLR

7.49

-6.14

-6.77

PDLPIRLRK

7.85

-3.46

-4.09

KPPDLPIRL

9.63

-3.64

-4.27

P53971

CPFLPSSLK

8.08

-3.09

-3.72

HPGKCPPCL

9.82

-2.95

-3.58

ACPFLPSSL

12.80

-0.36

-0.99

Q12168

PPLPPRANV

10.64

-3.60

-4.23

PPPLPPRAN

10.89

-3.94

-4.57

PPVPNRPGG

11.05

-2.83

-3.46

P27472

VPGSPRDLR

6.85

-4.12

-4.75

PLSVPGSPR

12.79

-3.27

-3.90

P36006

PPPMGQPKD

10.31

-2.94

-3.57

PMGQPKDPK

10.36

-2.30

-2.93

KKPKNPGGL

11.33

-0.95

-1.58

P32790

PIKPPRPTS

11.21

-2.14

-2.77

PAMPARPTA

11.43

-0.80

-1.43

APAPLDPFK

11.43

-1.37

-2.00

Q06440

RTPKVEPSK

9.29

-1.56

-2.19

Q06412

RPPPPPPLL

10.10

-4.66

-5.29

SPKSPRDSS

10.76

-1.68

-2.31

SPNSPKSPR

10.94

-3.80

-4.43

P34226

FVPVPPPQL

12.19

-2.33

-2.96

VPVPPPQLH

12.49

-2.37

-3.00

PVPPPQLHL

13.09

-2.82

-3.45

P36102

YPRIYPPPH

10.89

-3.38

-4.01

KYPRIYPPP

13.23

-3.66

-4.29

PPMQPPPIE

13.36

-1.69

-2.32

P53933

PPPIPSTQK

9.02

-2.80

-3.43

PPPLPNRQL

9.45

-4.03

-4.66

APPPLPNRQ

12.08

-3.99

-4.62

Q04439

PPPSSKPKE

9.88

-1.53

-2.16

PPPPGMQNK

10.21

-4.38

-5.01

PSSKPKEPM

10.49

-3.18

-3.81

Q12446

PPPPPRASR

7.58

-5.70

-6.33

PPPPRRGPA

9.50

-3.97

-4.60

RPLPQLPNR

10.16

-5.11

-5.74

P39969

LPPQPGSKK

8.96

-3.77

-4.40

QPPKSPLLN

10.00

-2.90

-3.53

LSPIPSPTR

10.61

-2.60

-3.23

P37370

QMPKPRPFQ

7.36

-1.75

-2.38

PKPRPFQNK

8.37

-4.13

-4.76

KVPQNRPHM

9.49

-4.85

-5.48

P53739

FFPQEPSPK

11.16

-1.42

-2.05

PSTPIMPSQ

12.34

-0.53

-1.16

STPIMPSQN

13.03

-1.13

-1.76

P40563

PSERPKRRA

8.22

-1.92

-2.55

PPPVPKKPS

9.31

-4.54

-5.17

RAPPPVPKK

10.46

-3.35

-3.98

P40325

RPPRPAANL

8.59

-3.60

-4.23

PPRPPRPAA

9.68

-5.41

-6.04

LPWTYPPRF

10.18

-3.39

-4.02

Q04195

HPSEPIIIN

11.91

-2.27

-2.90

PSEPIIINL

12.09

-0.54

-1.17

TPVLPTLPQ

12.12

-3.38

-4.01

Q07555

KTKVPKLPL

8.93

-3.54

-4.17

PLPASRPSL

9.10

-2.86

-3.49

VPKLPLPAS

10.42

-5.02

-5.65

Q05080

KPDKPRPIV

6.88

-5.06

-5.69

LRQKPDKPR

12.20

-1.98

-2.61

 


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