ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-13.PDB
Scoring matrix: BBC1_1TG0-13_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.25
Foldx random average score for Saccharomyces cerevisiae: 11.641

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2180689
Proteins after random average filtering: 5078
 Total fragments: 1102592
Proteins after disorder filtering: 3269
 Total fragments: 63206
Proteins after pattern filtering: 1555
 Total fragments: 9888
Proteins after MINT filtering: 28
 Total fragments: 525


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

15.25

2.30

0.00

Best peptides

RPRRFTRR

0.00

-5.51

-7.81

         
Interactors      
Q06604

PPPLPTRR

4.26

-7.57

-9.87

KPLLPTRP

4.98

-6.00

-8.30

LPTRPNKA

5.50

-6.93

-9.23

P24583

LPPQPRKH

6.42

-7.07

-9.37

PLPPQPRK

8.52

-3.43

-5.73

APLPPQPR

9.92

-3.42

-5.72

Q06625

LPPIPLPK

6.56

-5.21

-7.51

VLTLPPIP

8.62

-4.73

-7.03

GPKQGPVT

8.87

-2.38

-4.68

P19812

EPRPRRIP

9.32

-4.51

-6.81

HSPIFRPG

10.26

-1.56

-3.86

PIFRPGNI

10.54

-2.47

-4.77

P53182

RRNPGKPP

9.24

-2.18

-4.48

SRRNPGKP

9.30

-2.33

-4.63

P53169

MPTLPPRP

5.27

-8.78

-11.08

VPIMPTLP

7.20

-5.92

-8.22

IMPTLPPR

8.49

-4.89

-7.19

Q12043

APGRFPLQ

6.01

-4.97

-7.27

NPSRFPMD

6.21

-5.20

-7.50

RFPLQPLP

6.83

-4.36

-6.66

P40453

KPPDLPIR

5.62

-5.95

-8.25

IPPPLPPK

7.20

-5.57

-7.87

LRKRPPPP

7.45

-3.78

-6.08

P53971

CPFLPSSL

9.54

-3.49

-5.79

PFLPSSLK

9.69

-2.07

-4.37

EKACPFLP

9.88

-3.57

-5.87

Q12168

PPPLPPRA

7.04

-6.58

-8.88

PPPVPNRP

7.14

-5.88

-8.18

PVPKPNID

7.86

-4.86

-7.16

P27472

LSVPGSPR

7.56

-1.08

-3.38

P36006

PPPMGQPK

7.90

-3.98

-6.28

PPPPPPMG

8.68

-5.01

-7.31

KKPKNPGG

8.74

-3.42

-5.72

P32790

PPIKPPRP

6.27

-6.37

-8.67

LPPIKPPR

6.33

-5.16

-7.46

KPPRPTST

6.96

-5.75

-8.05

Q06440

TPKVEPSK

9.10

-3.32

-5.62

RTPKVEPS

10.90

-1.62

-3.92

Q06412

FFTKPPPP

7.79

-4.57

-6.87

RPPPPPPL

8.34

-5.31

-7.61

RRPPPPPP

8.69

-4.82

-7.12

P34226

FVPVPPPQ

7.89

-5.50

-7.80

PVPPPQLH

9.71

-3.62

-5.92

VPVPPPQL

10.11

-4.36

-6.66

P36102

YPRIYPPP

7.33

-4.39

-6.69

DPFNAPIF

8.61

-3.23

-5.53

NAPIFTPS

10.07

-0.29

-2.59

P53933

PPPLPNRQ

5.93

-7.15

-9.45

RPPPPPIP

6.07

-6.17

-8.47

YPGNPTSR

6.82

-6.04

-8.34

Q04439

SKPKEPMF

6.82

-2.76

-5.06

IPTPPQNR

8.04

-5.98

-8.28

APPPPGMQ

8.17

-4.41

-6.71

Q12446

LPQLPNRN

5.64

-7.91

-10.21

APPPPPRR

5.91

-6.16

-8.46

VPPPPPMR

5.91

-7.32

-9.62

P39969

PPQPGSKK

6.29

-3.14

-5.44

SPRRAPKP

7.65

-3.12

-5.42

LPPQPGSK

7.78

-5.23

-7.53

P37370

RPHMPSVR

3.57

-8.15

-10.45

APAVPSIP

7.76

-4.25

-6.55

MPKPRPFQ

7.96

-4.09

-6.39

P53739

FPQEPSPK

7.25

-4.85

-7.15

RRRSPSTP

8.49

-3.14

-5.44

PPLSPTIP

8.70

-3.15

-5.45

P40563

PSERPKRR

5.88

-6.05

-8.35

RRAPPPVP

7.86

-4.78

-7.08

TPKVPERP

7.96

-4.61

-6.91

P40325

QPPRPPRP

5.30

-6.95

-9.25

RPPRPAAN

6.88

-4.48

-6.78

LPWTYPPR

7.10

-4.63

-6.93

Q04195

TPVLPTLP

7.58

-5.55

-7.85

LPQNVPIR

8.03

-4.79

-7.09

EPIQFPFP

8.12

-2.75

-5.05

Q07555

KVPKLPLP

5.67

-4.30

-6.60

LPLPASRP

7.09

-4.99

-7.29

KTKVPKLP

7.74

-6.03

-8.33

Q05080

LRQKPDKP

6.85

-3.97

-6.27

KPDKPRPI

8.09

-5.55

-7.85

QKPDKPRP

9.06

-2.64

-4.94

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER