ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1FYN-29.PDB
Scoring matrix: BBC1_1FYN-29_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.59
Foldx random average score for Saccharomyces cerevisiae: 14.800

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 936035
Proteins after disorder filtering: 2778
 Total fragments: 34462
Proteins after pattern filtering: 1419
 Total fragments: 8619
Proteins after MINT filtering: 27
 Total fragments: 480


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

18.59

-3.23

0.00

Best peptides

DMKWMMYWFR

0.00

-8.77

-5.54

         
Interactors      
Q06604

KGPRMPSRGR

8.29

-11.31

-8.08

SPPPLPTRRD

9.49

-13.26

-10.03

TPPSPPAKRI

10.50

-10.25

-7.02

P24583

APLPPQPRKH

10.62

-10.86

-7.63

PLPPQPRKHD

10.99

-10.07

-6.84

LPPQPRKHDK

11.03

-9.34

-6.11

Q06625

GVLTLPPIPL

10.72

-10.63

-7.40

LTLPPIPLPK

11.71

-10.94

-7.71

LPPIPLPKDA

12.47

-8.47

-5.24

P19812

SPIFRPGNIF

10.99

-9.83

-6.60

PIFRPGNIFN

11.91

-8.70

-5.47

APQNPPPILQ

12.50

-9.37

-6.14

P53182

SSRRNPGKPP

11.71

-7.93

-4.70

P53169

IMPTLPPRPY

9.79

-13.14

-9.91

SVPIMPTLPP

10.22

-12.32

-9.09

NSVPIMPTLP

12.44

-8.30

-5.07

Q12043

NTLFNPSRFP

10.32

-10.52

-7.29

PSPSTSPQRS

11.87

-8.24

-5.01

PSRFPMDAMS

12.37

-7.57

-4.34

P40453

PDLPIRLRKR

9.29

-11.99

-8.76

KPPDLPIRLR

9.41

-13.77

-10.54

WKPPDLPIRL

9.70

-12.88

-9.65

P53971

GEKACPFLPS

10.78

-10.91

-7.68

QRKCHPGKCP

12.70

-8.95

-5.72

ACPFLPSSLK

12.89

-8.92

-5.69

Q12168

DDPYFPQFRS

9.09

-13.14

-9.91

GPPPLPPRAN

9.95

-10.80

-7.57

IPPPVPNRPG

10.22

-11.03

-7.80

P27472

RPLSVPGSPR

12.89

-8.81

-5.58

SVPGSPRDLR

13.23

-7.64

-4.41

LSVPGSPRDL

14.28

-5.04

-1.81

P36006

PPPPPMGQPK

9.90

-9.94

-6.71

MGQPKDPKFE

11.82

-7.29

-4.06

KSNKKPKNPG

11.87

-7.55

-4.32

P32790

LPPIKPPRPT

8.79

-11.73

-8.50

PPPAMPARPT

9.02

-12.71

-9.48

GPPPAMPARP

11.46

-10.68

-7.45

Q06412

RPPPPPPLLY

11.04

-11.48

-8.25

PPPPPPLLYS

11.87

-10.86

-7.63

EFFTKPPPPL

12.20

-8.31

-5.08

P34226

FVPVPPPQLH

10.78

-9.97

-6.74

PVPPPQLHLN

11.17

-10.86

-7.63

QEEDFVPVPP

13.63

-9.00

-5.77

P36102

YDPFNAPIFT

11.17

-9.17

-5.94

SNLKYPRIYP

11.51

-10.22

-6.99

VPPPMQPPPI

12.36

-9.45

-6.22

P53933

RRPPPPPIPS

10.16

-11.18

-7.95

VAPPPLPNRQ

11.13

-10.34

-7.11

APPPLPNRQL

11.49

-11.96

-8.73

Q04439

NIPTPPQNRD

10.84

-10.65

-7.42

PPPPGMQNKA

11.13

-9.44

-6.21

SSKPKEPMFE

11.19

-9.97

-6.74

Q12446

PAPPPPPHRH

8.75

-12.85

-9.62

RPLPQLPNRN

9.71

-10.69

-7.46

PAPPPPPRRG

9.83

-13.24

-10.01

P39969

AQPPKSPLLN

10.01

-11.18

-7.95

SPIPSPTRNS

11.02

-7.63

-4.40

CFKLLPPQPG

11.86

-8.35

-5.12

P37370

MPKPRPFQNK

9.07

-9.57

-6.34

NRPHMPSVRP

9.46

-13.24

-10.01

SQMPKPRPFQ

9.62

-11.29

-8.06

P53739

STPIMPSQNS

10.46

-9.34

-6.11

SPPLSPTIPE

10.88

-9.71

-6.48

PQEPSPKISD

12.31

-8.20

-4.97

P40563

APPPVPKKPS

10.05

-10.27

-7.04

KRRAPPPVPK

10.94

-9.14

-5.91

RAPPPVPKKP

12.57

-9.52

-6.29

P40325

SQPPRPPRPA

8.68

-14.98

-11.75

SQPRPPPRPQ

9.50

-11.94

-8.71

LPWTYPPRFY

9.57

-10.41

-7.18

Q04195

TLPQNVPIRT

11.08

-12.07

-8.84

SHPSEPIIIN

11.60

-9.40

-6.17

PVLPTLPQNV

11.92

-8.56

-5.33

Q07555

SWKTKVPKLP

11.22

-8.80

-5.57

TKVPKLPLPA

11.50

-10.44

-7.21

KLPLPASRPS

12.84

-9.39

-6.16

Q05080

RQKPDKPRPI

10.12

-8.60

-5.37

PDKPRPIVGE

11.73

-9.62

-6.39

QKPDKPRPIV

12.81

-9.39

-6.16

 


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