ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1FYN-21.PDB
Scoring matrix: BBC1_1FYN-21_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 19.14
Foldx random average score for Saccharomyces cerevisiae: 16.899

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 1284901
Proteins after disorder filtering: 3027
 Total fragments: 50222
Proteins after pattern filtering: 1160
 Total fragments: 2998
Proteins after MINT filtering: 23
 Total fragments: 118


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

19.14

-0.87

0.00

Best peptides

ERRWHRPNMR

0.00

1.08

1.95

         
Interactors      
Q06604

PLLPTRPNKA

9.97

-4.78

-3.91

RVKPAPPVSR

12.84

-5.89

-5.02

EKGPRMPSRG

12.85

-4.28

-3.41

P24583

PLPPQPRKHD

15.85

-4.44

-3.57

PPQPRKHDKT

16.47

-3.50

-2.63

Q06625

GPKQGPVTVD

15.01

-3.20

-2.33

VGIPGTPRDG

16.34

-2.17

-1.30

GGPKQGPVTV

16.77

-2.26

-1.39

P19812

SPIFRPGNIF

13.68

-4.36

-3.49

HSPIFRPGNI

13.89

-3.93

-3.06

RPRRIPPTDE

15.38

-3.40

-2.53

Q12043

GVFPSTPLFE

15.32

-4.92

-4.05

QPLPSPSSTF

16.37

-2.93

-2.06

SPSTSPQRSK

16.53

-4.83

-3.96

P40453

PDLPIRLRKR

10.59

-6.79

-5.92

WKPPDLPIRL

13.04

-6.59

-5.72

TKVPEPPSWK

13.44

-6.29

-5.42

Q12168

PNRPGGTTNR

9.30

-5.54

-4.67

NDDPYFPQFR

11.77

-2.91

-2.04

PPVPNRPGGT

14.64

-2.66

-1.79

P27472

LSVPGSPRDL

14.10

-3.93

-3.06

PGSPRDLRSN

15.56

-3.50

-2.63

P36006

NKKPKNPGGL

12.10

-4.46

-3.59

PKNPGGLSGK

13.17

-3.78

-2.91

MGQPKDPKFE

14.40

-3.06

-2.19

P32790

PLDPFKTGGN

13.33

-3.51

-2.64

PPRPTSTTSV

14.23

-3.04

-2.17

APAPLDPFKT

14.83

-3.55

-2.68

Q06412

PKSPRDSSKQ

14.88

-3.23

-2.36

PPPPLSTSRN

14.98

-4.32

-3.45

PKLPPLNTRN

15.31

-4.98

-4.11

P53971

PFLPSSLKTC

12.96

-3.04

-2.17

DPNPLDPNSC

14.75

-2.65

-1.78

KACPFLPSSL

15.31

-3.12

-2.25

P36102

YDPFNAPIFT

16.54

-2.38

-1.51

NAPIFTPSST

16.88

-3.88

-3.01

P53933

VSYPGNPTSR

11.14

-3.77

-2.90

PPPPIPSTQK

15.35

-4.91

-4.04

APPPLPNRQL

16.11

-5.68

-4.81

Q04439

NNIPTPPQNR

12.16

-4.37

-3.50

PPPPGMQNKA

13.25

-4.28

-3.41

NARPSPPTAA

14.88

-3.60

-2.73

Q12446

RPLPQLPNRN

7.84

-5.70

-4.83

ALPPASPEVR

12.91

-3.69

-2.82

NNAPSQPQSN

13.35

-3.75

-2.88

P39969

PKSPLLNNTR

10.07

-3.82

-2.95

PPQPGSKKGL

12.33

-3.75

-2.88

LLPPQPGSKK

13.74

-5.84

-4.97

P53739

PIMPSQNSNN

14.17

-2.82

-1.95

PSTPIMPSQN

14.68

-3.03

-2.16

P40563

NSQPQGPSDT

16.33

-1.58

-0.71

P40325

YVQPGDPRLG

11.72

-5.07

-4.20

SRPHQRPSTM

12.24

-6.31

-5.44

LPWTYPPRFY

14.34

-6.33

-5.46

P37370

QNRPHMPSVR

9.53

-6.20

-5.33

ASAPKVPQNR

12.91

-4.14

-3.27

RPSPISPSIN

13.16

-4.18

-3.31

Q07555

PLPASRPSLN

13.51

-3.24

-2.37

LSPQKVPTGT

15.29

-2.31

-1.44

Q04195

PVLPTLPQNV

14.32

-2.82

-1.95

NSVPNPPNTA

14.33

-2.11

-1.24

PSEPIIINLD

14.42

-3.91

-3.04

 


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