ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1FYN-18.PDB
Scoring matrix: BBC1_1FYN-18_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 17.95
Foldx random average score for Saccharomyces cerevisiae: 17.447

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2170533
Proteins after random average filtering: 5078
 Total fragments: 950673
Proteins after disorder filtering: 3092
 Total fragments: 57136
Proteins after pattern filtering: 1497
 Total fragments: 8637
Proteins after MINT filtering: 28
 Total fragments: 365


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

17.95

0.94

0.00

Best peptides

FPPLRSNYAY

0.00

-1.81

-2.75

         
Interactors      
Q06604

LLPTRPNKAE

9.68

-4.67

-5.61

KGPRMPSRGR

10.19

-5.19

-6.13

KPTPPSPPAK

11.73

-5.35

-6.29

P24583

LPPQPRKHDK

12.05

-7.08

-8.02

NAPLPPQPRK

13.98

-5.38

-6.32

APLPPQPRKH

14.40

-3.56

-4.50

Q06625

LPPIPLPKDA

14.76

-5.54

-6.48

PIPLPKDAPK

16.47

-4.19

-5.13

P19812

PQNPPPILQF

13.46

-3.47

-4.41

PIFRPGNIFN

15.94

-4.89

-5.83

HSPIFRPGNI

15.96

-3.99

-4.93

P53182

KSSRRNPGKP

16.56

-1.06

-2.00

P53169

IMPTLPPRPY

11.87

-4.54

-5.48

VPIMPTLPPR

15.70

-7.71

-8.65

YSPAQPSASL

16.24

-0.58

-1.52

Q12043

LQPLPSPSST

10.58

-3.00

-3.94

SPSTSPQRSK

10.93

-3.97

-4.91

FPSTPLFEKD

12.65

-3.54

-4.48

P40453

RPPPPPPVSM

11.91

-5.92

-6.86

PPDLPIRLRK

12.41

-7.34

-8.28

DCPRCGPTAS

13.90

-1.76

-2.70

P53971

CPFLPSSLKT

9.16

-5.91

-6.85

RKCHPGKCPP

15.27

-2.72

-3.66

NPLDPNSCGQ

15.52

-3.06

-4.00

Q12168

PPPLPPRANV

13.58

-8.13

-9.07

GPPPLPPRAN

14.40

-4.42

-5.36

PPPVPNRPGG

14.59

-5.28

-6.22

P27472

VPGSPRDLRS

14.74

-6.04

-6.98

RPLSVPGSPR

15.20

-3.09

-4.03

PGSPRDLRSN

16.72

-2.20

-3.14

P36006

KPKNPGGLSG

10.99

-4.49

-5.43

IPPPPPPMGQ

12.55

-6.30

-7.24

PKDPKFEAAY

13.88

-1.18

-2.12

P32790

LPPIKPPRPT

10.89

-7.97

-8.91

APLDPFKTGG

15.00

-3.47

-4.41

APAPLDPFKT

15.99

-2.99

-3.93

Q06440

KDRTPKVEPS

17.04

-1.86

-2.80

KKDRTPKVEP

17.43

-0.58

-1.52

Q06412

PMVSPSSQSR

12.31

-2.20

-3.14

KPPPPLSTSR

12.52

-4.52

-5.46

PPPPPPLLYS

12.64

-6.40

-7.34

P34226

VPVPPPQLHL

14.37

-5.68

-6.62

TPTNSPSPGA

16.40

-2.63

-3.57

PTNSPSPGAL

17.09

-0.04

-0.98

P36102

SNLKYPRIYP

15.32

-2.98

-3.92

NLKYPRIYPP

15.54

-1.90

-2.84

PIFTPSSTSS

15.71

-0.71

-1.65

P53933

YNDLPMELPH

12.61

-6.72

-7.66

PPPIPSTQKP

13.20

-5.09

-6.03

RPPPPPIPST

13.44

-5.01

-5.95

Q04439

PPPPPSSKPK

13.44

-4.72

-5.66

PPPPPPPSSK

13.84

-4.76

-5.70

KPKEPMFEAA

14.11

-2.39

-3.33

Q12446

LPQLPNRNNR

10.34

-10.08

-11.02

IPEIPSTQSA

10.34

-4.71

-5.65

LPPLPNQFAP

11.07

-7.88

-8.82

P39969

LPPQPGSKKG

9.57

-6.06

-7.00

FKLLPPQPGS

11.20

-6.02

-6.96

RAPKPPSYPS

12.24

-5.70

-6.64

P37370

RPHMPSVRPA

10.74

-6.81

-7.75

PPPLPAAMSS

11.69

-6.28

-7.22

KPPSPPVAAA

11.85

-3.97

-4.91

P53739

TPIMPSQNSN

11.70

-5.81

-6.75

FFPQEPSPKI

13.01

-4.26

-5.20

RSPSTPIMPS

14.70

-3.20

-4.14

P40563

PSERPKRRAP

14.48

-4.33

-5.27

RRAPPPVPKK

14.54

-4.67

-5.61

KRRAPPPVPK

14.93

-5.03

-5.97

P40325

LPWTYPPRFY

11.11

-6.63

-7.57

RPQQNPSLPW

11.13

-5.43

-6.37

QPPRPPRPAA

11.43

-5.41

-6.35

Q04195

LPTLPQNVPI

10.92

-8.30

-9.24

PPPTNPDASS

14.50

-2.85

-3.79

LPQNVPIRTN

14.85

-2.78

-3.72

Q07555

VPKLPLPASR

10.85

-5.62

-6.56

WKTKVPKLPL

11.50

-5.62

-6.56

KLPLPASRPS

12.88

-6.57

-7.51

Q05080

KPDKPRPIVG

14.17

-2.79

-3.73

RQKPDKPRPI

16.06

-2.21

-3.15

PDKPRPIVGE

16.16

-2.33

-3.27

 


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