ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1OV32-19.PDB
Scoring matrix: ABP1_1OV32-19_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 22.47
Foldx random average score for Saccharomyces cerevisiae: 21.138

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2176176
Proteins after random average filtering: 5078
 Total fragments: 956467
Proteins after disorder filtering: 3085
 Total fragments: 46972
Proteins after pattern filtering: 1325
 Total fragments: 4856
Proteins after MINT filtering: 25
 Total fragments: 150


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

22.47

5.32

0.00

Best peptides

MRKKHGWSF

0.00

-0.72

-6.04

         
Interactors      
P09119

AQVPLTPTT

20.41

0.81

-4.51

VPLTPTTSP

20.72

-0.42

-5.74

P40325

PRPQQNPSL

17.76

-2.30

-7.62

RPPRPAANL

18.82

-3.55

-8.87

PRPPPRPQQ

18.98

-2.31

-7.63

P53145

PGQPPLINI

18.47

-1.60

-6.92

PPLPGQPPL

20.01

-0.61

-5.93

PNEPLLPPL

20.99

-1.29

-6.61

P48562

GQFPRGPMH

16.14

-1.24

-6.56

PLNPYRPHH

16.50

-1.88

-7.20

PYRPHHNMI

16.91

-4.21

-9.53

P17555

PPAPPASVF

16.00

-3.33

-8.64

PPRPKKPST

16.24

-0.80

-6.12

RPKKPSTLK

17.93

-0.67

-5.99

P40494

PRPPPKPLH

18.31

-3.69

-9.01

QPPNMMPVT

20.57

0.36

-4.96

PPNMMPVTH

20.80

-0.36

-5.68

P08458

NLPKRKPPK

20.35

-3.61

-8.93

TNLPKRKPP

20.50

-2.03

-7.35

LPKRKPPKL

21.12

-0.53

-5.85

P43603

FTAPTSPST

20.03

-1.77

-7.09

APTSPSTSS

20.42

0.68

-4.64

PTSPSTSSP

21.02

-3.31

-8.63

P40095

PRSPNRPTL

16.81

-5.39

-10.71

PDSPSSSSL

17.54

-2.42

-7.74

LPPPRSPNR

18.81

-1.68

-7.00

Q12168

VPNRPGGTT

17.40

0.56

-4.76

PNRPGGTTN

17.43

-1.13

-6.45

NDDPYFPQF

17.72

-0.60

-5.92

Q06449

PFPPPSTNY

19.06

-4.76

-10.07

P32793

GHGPTHPSN

18.60

-4.01

-9.32

PTHPSNMSN

20.40

-0.97

-6.29

P32790

APAPLDPFK

16.51

2.74

-2.58

PPRPTSTTS

19.57

-0.85

-6.17

APLDPFKTG

19.70

0.87

-4.45

Q01389

RRYPQTPSY

14.87

-4.26

-9.57

RPVPPDSSY

15.76

-3.12

-8.44

YPQTPSYYY

17.28

1.65

-3.67

P53974

PPKPSHLKP

16.65

-3.06

-8.38

PPDPHSNSS

16.98

-1.73

-7.04

PTPPPKPSH

17.98

-0.78

-6.10

Q06836

PPLSPSSFI

18.86

1.77

-3.55

NKPPLSPSS

19.28

-0.14

-5.46

PLLPDDANI

20.98

-0.12

-5.44

Q05580

PPPKPKVQI

14.09

-1.40

-6.71

QLPPPKPKV

18.80

-2.42

-7.74

PPKPKVQIP

20.08

-1.53

-6.85

P53933

PPIPSTQKP

18.36

-2.25

-7.57

PPPPPIPST

19.93

-1.16

-6.48

NDLPMELPH

20.67

-1.71

-7.03

Q04439

APPPPGMQN

17.33

1.30

-4.02

SSKPKEPMF

17.90

-0.95

-6.27

PPPPSSKPK

18.18

-1.10

-6.42

Q08873

KPRPPVKSK

14.71

-3.24

-8.55

PRPPVKSKP

17.15

-3.09

-8.41

P38885

APPSPENSH

18.41

-0.61

-5.93

P50942

PPPPPTSRH

17.21

-0.77

-6.09

LPPVPALSL

17.53

-2.01

-7.33

PPPPTSRHN

17.76

-2.65

-7.96

P48415

PPPPIVKRK

16.42

-2.18

-7.50

APPKPKSTD

17.04

0.69

-4.63

PPPPPIVKR

17.15

-2.33

-7.65

P40563

NSQPQGPSD

18.83

1.18

-4.14

PSERPKRRA

19.08

-0.79

-6.11

PPTPAGTPN

19.88

1.66

-3.66

P39743

AYSNPLTSP

21.10

-2.06

-7.38

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER