ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1JO8-1.PDB
Scoring matrix: ABP1_1JO8-1_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 25.89
Foldx random average score for Saccharomyces cerevisiae: 21.857

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171098
Proteins after random average filtering: 5078
 Total fragments: 996733
Proteins after disorder filtering: 2935
 Total fragments: 49615
Proteins after pattern filtering: 1504
 Total fragments: 11530
Proteins after MINT filtering: 26
 Total fragments: 379


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

25.89

-2.56

0.00

Best peptides

RMRRHRRRRH

0.00

-10.99

-8.43

         
Interactors      
P09119

QVPLTPTTSP

20.12

-5.44

-2.88

LTPTTSPVKK

20.15

-5.07

-2.51

P43603

QGRFTAPTSP

21.20

-5.44

-2.88

P53145

PLLPPLPGQP

18.45

-8.73

-6.17

PLPGQPPLIN

19.09

-8.06

-5.50

LLPPLPGQPP

19.18

-7.49

-4.93

P48562

QTMRQAPKRP

12.52

-9.74

-7.18

QFPRGPMHPN

14.73

-6.23

-3.67

QPQRTAPKPP

14.98

-9.96

-7.40

P17555

KSGPPPRPKK

14.26

-9.00

-6.44

SKSGPPPRPK

15.03

-8.10

-5.54

PRPKKPSTLK

16.14

-9.45

-6.89

P40494

DKSRPPRPPP

11.86

-7.76

-5.20

GKDKSRPPRP

12.71

-8.70

-6.14

RPPRPPPKPL

13.25

-12.81

-10.25

P08458

LPKRKPPKLQ

12.68

-11.26

-8.70

MTNLPKRKPP

15.74

-10.69

-8.13

NLPKRKPPKL

15.80

-9.25

-6.69

P40325

QPPRPPRPAA

12.27

-9.37

-6.81

SQPRPPPRPQ

12.37

-6.59

-4.03

QSQPPRPPRP

12.93

-8.21

-5.65

P40095

VLPPPRSPNR

14.33

-6.30

-3.74

PRSPNRPTLS

15.93

-10.07

-7.51

RIPVLPPPRS

16.38

-9.55

-6.99

Q12168

TTNRGPPPLP

13.45

-10.48

-7.92

QHPVPKPNID

16.13

-7.73

-5.17

NKVQHPVPKP

17.46

-8.02

-5.46

Q06449

PSNLPPPPQY

16.83

-7.72

-5.16

QPFPPPSTNY

18.15

-4.56

-2.00

QQPQQQPQQA

18.45

-4.68

-2.12

P32793

GHGPTHPSNM

18.73

-6.28

-3.72

SLGHGPTHPS

19.22

-6.27

-3.71

P32790

LPPIKPPRPT

18.57

-8.23

-5.67

PPIKPPRPTS

18.70

-9.82

-7.26

GPPPAMPARP

19.16

-7.77

-5.21

P53974

SHLKPKPPPK

13.71

-7.90

-5.34

HLKPKPPPKP

15.97

-10.02

-7.46

LKPKPPPKPL

16.12

-8.92

-6.36

Q01389

KRSKPLPPQL

15.46

-9.63

-7.07

SKPLPPQLLS

15.91

-7.50

-4.94

RSKPLPPQLL

16.65

-8.43

-5.87

Q05580

QLPPPKPKVQ

15.27

-7.43

-4.87

LKSLNLPQLP

15.90

-10.67

-8.11

NLPQLPPPKP

15.91

-8.86

-6.30

P53933

VRTRRRPPPP

9.95

-11.89

-9.33

RTRRRPPPPP

11.93

-14.14

-11.58

TRRRPPPPPI

12.94

-8.68

-6.12

Q04439

RHSKKPAPPP

15.16

-10.56

-8.00

SKPKEPMFEA

15.67

-5.55

-2.99

SQSNARPSPP

15.77

-5.60

-3.04

Q08873

KKPRPPVKSK

12.39

-9.42

-6.86

STKKPRPPVK

12.65

-9.64

-7.08

QLSTKKPRPP

14.24

-8.50

-5.94

Q06836

PMGSRGPLLP

18.54

-9.81

-7.25

AKNKPPLSPS

18.86

-5.67

-3.11

KPPLSPSSFI

19.07

-6.96

-4.40

P50942

IVPRPCPPIR

13.41

-9.78

-7.22

RHSTPKPLPP

15.16

-10.33

-7.77

KLNVLPPPPP

15.38

-8.96

-6.40

P48415

KNLLPMEPNH

14.92

-6.14

-3.58

KMNYSPYVPQ

15.43

-7.72

-5.16

PKTKPRSGPI

15.88

-8.21

-5.65

P40563

PKRRAPPPVP

12.61

-9.82

-7.26

PSERPKRRAP

13.00

-7.27

-4.71

KRRAPPPVPK

15.50

-9.16

-6.60

P38822

APEVPPPRRS

18.57

-6.84

-4.28

PAPEVPPPRR

18.74

-6.22

-3.66

Q12134

RSTHQPVPSP

20.22

-6.69

-4.13

QPVPSPMNSQ

20.32

-4.92

-2.36

THQPVPSPMN

20.36

-5.84

-3.28

P39743

PNATIPEDNP

20.65

-4.49

-1.93

 


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