ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2PLD2.PDB
Scoring matrix: 2PLD2_mat
Uniprot code: P08487
Genome source: Bos taurus
Wild-type ligand: DNDyIIPLPDPK
Foldx wt ligand score: 6.81
Foldx random average score for Bos taurus: 23.066

Available information for P08487 in MINT (Nov 2008):
Nš of interacting proteins: 4
 Proteins belonging to other specie: 4
Nš of interactions described: 16
 Interactions with other species: 16

Genome scanning information:
Subcellular location: True
Proteins in genome Bos taurus: 15166
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 3661
Total scanned proteins: 11504
 Total fragments: 4438681
Proteins after random average filtering: 11499
 Total fragments: 2515293
Proteins after disorder filtering: 8202
 Total fragments: 222455
Proteins after pattern filtering: 4154
 Total fragments: 32624
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

DNDyIIPLPDPK

6.81

-4.53

0.00

Best peptides

yyYsVEGyPGyy

0.00

6.10

10.63

         
Interactors      

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER