ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2O982.PDB
Scoring matrix: 2O982_mat
Uniprot code: P93343
Genome source: Nicotiana tabacum
Wild-type ligand: DIETIQQSYDI
Foldx wt ligand score: 5.28
Foldx random average score for Nicotiana tabacum: 15.041

Available information for P93343 in MINT (Nov 2008):
Nš of interacting proteins: 0
 Proteins belonging to other specie: 0
Nš of interactions described: 0
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Nicotiana tabacum: 2390
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 670
Total scanned proteins: 1719
 Total fragments: 618856
Proteins after random average filtering: 1717
 Total fragments: 346490
Proteins after disorder filtering: 1111
 Total fragments: 13729
Proteins after pattern filtering: 61
 Total fragments: 125
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

DIETIQQSYDI

5.28

-17.83

0.00

Best peptides

sMyKWRsCYDI

0.00

-19.04

-1.21

         
Interactors      

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER