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Matrix information:
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ADAN-name: 2I0L2.PDB
Scoring matrix: 2I0L2_mat
Uniprot code: Q62696
Genome source: Rattus norvegicus
Wild-type ligand: RRETQV
Foldx wt ligand score: 4.78
Foldx random average score for Rattus norvegicus: 8.326 Available information for Q62696 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 6
Nš of interactions described: 22
Interactions with other species: 12
Genome scanning information:
Subcellular location: True
Proteins in genome Rattus norvegicus: 15006
Proteins located in other compartments: 2063
Proteins considered as fragments or having non-standard amino acids: 3052
Total scanned proteins: 9891
Total fragments: 4706696
Proteins after random average filtering: 9891
Total fragments: 3267719
Proteins after disorder filtering: 7753
Total fragments: 216782
Proteins after pattern filtering: 5998
Total fragments: 29316
Proteins after MINT filtering: 3
Total fragments: 14
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
RRETQV |
4.78
|
-8.90 |
0.00 |
| Best peptides |
WMMMDL |
0.00
|
-10.51 |
-1.61 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q9WVI4 |
CPLSKL |
4.38
|
-9.43 |
-0.53 |
|
PPGSRA |
7.59
|
-5.01 |
3.89 |
| Q63226 |
TLGLNL |
3.92
|
-8.88 |
0.02 |
|
NDDYTL |
4.55
|
-7.40 |
1.50 |
|
NPVTGL |
4.59
|
-8.68 |
0.22 |
| Q00959 |
SCLSNL |
3.98
|
-10.54 |
-1.64 |
|
RSKSLL |
4.61
|
-8.51 |
0.39 |
|
EPSFHL |
4.63
|
-7.69 |
1.21 |
|
