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Matrix information:
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ADAN-name: 2I0I2.PDB
Scoring matrix: 2I0I2_mat
Uniprot code: Q62696
Genome source: Rattus norvegicus
Wild-type ligand: RRETQV
Foldx wt ligand score: 5.85
Foldx random average score for Rattus norvegicus: 8.257 Available information for Q62696 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 6
Nš of interactions described: 22
Interactions with other species: 12
Genome scanning information:
Subcellular location: True
Proteins in genome Rattus norvegicus: 15006
Proteins located in other compartments: 2063
Proteins considered as fragments or having non-standard amino acids: 3052
Total scanned proteins: 9891
Total fragments: 4706696
Proteins after random average filtering: 9891
Total fragments: 2988361
Proteins after disorder filtering: 7683
Total fragments: 196910
Proteins after pattern filtering: 5806
Total fragments: 25964
Proteins after MINT filtering: 3
Total fragments: 12
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
RRETQV |
5.85
|
-8.31 |
0.00 |
| Best peptides |
AKIEHV |
0.00
|
-7.00 |
1.31 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q9WVI4 |
CPLSKL |
8.11
|
-5.69 |
2.62 |
| Q63226 |
TLGLNL |
5.22
|
-6.86 |
1.45 |
|
NDDYTL |
6.27
|
-6.52 |
1.79 |
|
KTMSSI |
6.61
|
-5.55 |
2.76 |
| Q00959 |
EPSFHL |
5.75
|
-6.58 |
1.73 |
|
RSKSLL |
6.67
|
-6.45 |
1.86 |
|
KGDSTL |
6.96
|
-4.31 |
4.00 |
|
