ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2H8H3.PDB
Scoring matrix: 2H8H3_mat
Uniprot code: P12931
Genome source: Homo sapiens
Wild-type ligand: VCPTSKPQTQGLAKDA
Foldx wt ligand score: 8.22
Foldx random average score for Homo sapiens: 14.504

Available information for P12931 in MINT (Nov 2008):
Nš of interacting proteins: 50
 Proteins belonging to other specie: 11
Nš of interactions described: 106
 Interactions with other species: 20

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 48060
 Total fragments: 21815789
Proteins after random average filtering: 48006
 Total fragments: 12599217
Proteins after disorder filtering: 30423
 Total fragments: 600735
Proteins after pattern filtering: 21644
 Total fragments: 215819
Proteins after MINT filtering: 27
 Total fragments: 501


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

VCPTSKPQTQGLAKDA

8.22

-9.27

0.00

Best peptides

EWDEDMPETYGWMFRW

0.00

-13.24

-3.97

         
Interactors      
Q13177

KPPAPPVRMSSTIFST

11.03

-11.35

-2.08

EDKPPAPPVRMSSTIF

11.57

-7.99

1.28

DKPPAPPVRMSSTIFS

12.15

-9.49

-0.22

Q8TBB1

YVSSAEDGQPAISPVD

13.33

-8.60

0.67

EDGQPAISPVDSGRSN

14.03

-6.68

2.59

Q8WUM4

QYNMPYPPVYHQSPGQ

8.75

-11.11

-1.84

PGYPGYCQMPMPMGYN

10.08

-9.95

-0.68

PPPPVLPANRAPSATA

11.05

-8.93

0.34

Q16832

CSGVVKPVQPSGPEGV

13.56

-7.82

1.45

Q05193

RGPAPGPPPAGSALGG

10.53

-7.99

1.28

SRPGASPDPFGPPPQV

11.26

-11.14

-1.87

RPNRAPPGVPSRSGQA

11.96

-8.25

1.02

P15941

TTTPASKSTPFSIPSH

10.35

-8.83

0.44

STPFSIPSHHSDTPTT

11.37

-9.07

0.20

SAPDNRPALGSTAPPV

12.18

-10.40

-1.13

P09848

TGPHACLHQPDAGPTI

12.89

-7.70

1.57

NGFPDPATGPHACLHQ

13.26

-7.02

2.25

P05106

PVSPYMYISPPEALEN

13.11

-11.33

-2.06

P00533

SCQKCDPSCPNGSCWG

11.43

-7.39

1.88

PSRDPHYQDPHSTAVG

11.79

-6.56

2.71

QNPVYHNQPLNPAPSR

11.79

-9.33

-0.06

P49407

FTFEIPPNLPCSVTLQ

10.32

-9.50

-0.23

HPKPKEEPPHREVPEN

12.46

-10.16

-0.89

PPNLPCSVTLQPGPED

12.79

-7.34

1.93

P22681

PQRRPLPCTPGDCPSR

5.60

-13.11

-3.84

PSRDKLPPVPSSRLGD

9.09

-13.08

-3.81

SQMEPRPDVPRLGSTF

9.28

-10.50

-1.23

P18031

PPPEHIPPPPRPPKRI

11.76

-14.11

-4.84

PPPPRPPKRILEPHNG

13.50

-8.90

0.37

IPPPPRPPKRILEPHN

13.79

-11.15

-1.88

P03372

SPLMLLHPPPQLSPFL

11.40

-12.26

-2.99

PLMLLHPPPQLSPFLQ

12.11

-10.44

-1.17

GQTGLPYGPGSEAAAF

12.71

-6.55

2.72

P49023

SSPPGGPPKPGSQLDS

10.61

-7.64

1.63

EANSSPPLPGALSPLY

11.12

-8.97

0.30

VPPPVPPPPSSEALNG

11.33

-10.19

-0.92

Q05397

ENGERLPMPPNCPPTL

9.83

-12.41

-3.14

PPRPGAPGHLGSLASL

10.77

-9.43

-0.16

PKKPPRPGAPGHLGSL

11.15

-10.84

-1.57

P50570

PGPPLIPVPVGAAASF

10.31

-8.51

0.76

PPIPSRPGPQSVFANS

10.77

-10.00

-0.73

FSAPPIPSRPGPQSVF

11.17

-6.38

2.89

Q07666

QTPSRQPPLPHRSRGG

9.43

-10.36

-1.09

QPPLPHRSRGGGGGSR

11.53

-6.42

2.85

TQPPPLLPPSATGPDA

11.68

-8.75

0.52

Q9C0H9

ASGSPPPGLPSGLPSG

10.09

-11.43

-2.16

AAPKSSPRSPGGRRGD

10.27

-8.25

1.02

SKSPPPPPPRRSFPSS

10.40

-11.98

-2.71

P55196

PPCQPRPASDGVFLSN

9.00

-11.74

-2.47

LPPEKLPYLVELSPDG

9.38

-9.47

-0.20

SEPKKLPGDDRLMKNR

9.59

-12.66

-3.39

P00519

TDVPEMPHSKGQGESD

9.39

-8.05

1.22

LKKPVLPATPKPQSAK

9.79

-8.97

0.30

PAKSPKPSNGAGVPNG

10.15

-9.26

0.01

Q9H5V8

NINTEMPRQPKKFQKG

9.97

-11.53

-2.26

INTEMPRQPKKFQKGR

10.80

-8.87

0.40

YNGNINTEMPRQPKKF

12.36

-10.01

-0.74

Q13444

SGPSERPGPPQRALLA

9.64

-11.91

-2.64

PRKPLPADPQGRCPSG

10.42

-10.45

-1.18

RPTRGDCDLPEFCPGD

10.49

-9.61

-0.34

Q06124

DQSPLPPCTPTPPCAE

14.20

-8.25

1.02

Q9Y5K6

PPKKPTPPTKASNLLR

9.39

-9.74

-0.47

RPKMPGRRLPGRFNGG

11.19

-7.88

1.39

PKKPTPPTKASNLLRS

11.68

-9.43

-0.16

P56945

QYTPMLPNTYQPQPDS

8.15

-12.25

-2.98

IQSRPLPSPPKFTSQD

10.27

-12.14

-2.87

NWTPAQPLAPGRTGGL

10.50

-7.05

2.22

P06241

GTDPTPQHYPSFGVTS

13.08

-7.61

1.66

GYRYGTDPTPQHYPSF

13.17

-7.40

1.87

TDPTPQHYPSFGVTSI

13.24

-7.62

1.65

P21860

LHPVPIMPTAGTTPDE

10.03

-7.23

2.04

QSCPLHPVPIMPTAGT

11.34

-6.33

2.94

SLGSTQSCPLHPVPIM

12.30

-6.58

2.69

 


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