ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2EJY2.PDB
Scoring matrix: 2EJY2_mat
Uniprot code: Q00013
Genome source: Homo sapiens
Wild-type ligand: RKEYCI
Foldx wt ligand score: 4.93
Foldx random average score for Homo sapiens: 9.025

Available information for Q00013 in MINT (Nov 2008):
Nš of interacting proteins: 4
 Proteins belonging to other specie: 0
Nš of interactions described: 5
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 7744
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 40317
 Total fragments: 18371814
Proteins after random average filtering: 40313
 Total fragments: 9699595
Proteins after disorder filtering: 31614
 Total fragments: 919785
Proteins after pattern filtering: 23747
 Total fragments: 113607
Proteins after MINT filtering: 3
 Total fragments: 10


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

RKEYCI

4.93

-8.89

0.00

Best peptides

DMMFCM

0.00

-2.70

6.19

         
Interactors      
P04921

STAWPL

6.12

-6.19

2.70

PGMASA

6.35

-2.83

6.06

AWPLSL

6.72

-2.78

6.11

Q9UNE7

EGGARL

6.43

-4.43

4.46

GARLGA

8.80

-2.67

6.22

O43147

LPAWHL

6.18

-3.28

5.61

SHCSCI

6.40

-5.77

3.12

QGSSCL

6.74

-6.32

2.57

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER