Matrix information:
(Help) ADAN-name: 2DRM2.PDB Scoring matrix: 2DRM2_mat Uniprot code: P19706 Genome source: Acanthamoeba castellanii Wild-type ligand: AKPVPPPRGAKPAPPPR Foldx wt ligand score: 8.56 Foldx random average score for Acanthamoeba castellanii: 16.831 Available information for P19706 in MINT (Nov 2008): Nš of interacting proteins: 0 Proteins belonging to other specie: 0 Nš of interactions described: 0 Interactions with other species: 0
Genome scanning information:
Subcellular location: True Proteins in genome Acanthamoeba castellanii: 132
Proteins located in other compartments: 1 Proteins considered as fragments or having non-standard amino acids: 54 Total scanned proteins: 77 Total fragments: 26532 Proteins after random average filtering: 77 Total fragments: 13259 Proteins after disorder filtering: 20 Total fragments: 442 Proteins after pattern filtering: 10 Total fragments: 277 Proteins after MINT filtering: 0 Total fragments: 0
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
AKPVPPPRGAKPAPPPR |
8.56
|
-19.49 |
0.00 |
Best peptides |
RRRNMFGFMHRKIRDDR |
0.00
|
-20.63 |
-1.14 |
|
|
|
|
|
Interactors |
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