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Matrix information:
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ADAN-name: 2DRK2.PDB
Scoring matrix: 2DRK2_mat
Uniprot code: P19706
Genome source: Acanthamoeba castellanii
Wild-type ligand: RPKPVPPPRG
Foldx wt ligand score: 1.97
Foldx random average score for Acanthamoeba castellanii: 9.253 Available information for P19706 in MINT (Nov 2008):
Nš of interacting proteins: 0
Proteins belonging to other specie: 0
Nš of interactions described: 0
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Acanthamoeba castellanii: 132
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 54
Total scanned proteins: 77
Total fragments: 27071
Proteins after random average filtering: 77
Total fragments: 13385
Proteins after disorder filtering: 26
Total fragments: 733
Proteins after pattern filtering: 16
Total fragments: 329
Proteins after MINT filtering: 0
Total fragments: 0
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
RPKPVPPPRG |
1.97
|
-12.22 |
0.00 |
| Best peptides |
RGRPEIPGRR |
0.00
|
-10.99 |
1.23 |
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