ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2D0N2.PDB
Scoring matrix: 2D0N2_mat
Uniprot code: O89100
Genome source: Mus musculus
Wild-type ligand: PSIDRSTKP
Foldx wt ligand score: 6.15
Foldx random average score for Mus musculus: 15.651

Available information for O89100 in MINT (Nov 2008):
Nš of interacting proteins: 14
 Proteins belonging to other specie: 8
Nš of interactions described: 28
 Interactions with other species: 14

Genome scanning information:
Subcellular location: True
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 44445
 Total fragments: 20419696
Proteins after random average filtering: 44442
 Total fragments: 9233651
Proteins after disorder filtering: 31508
 Total fragments: 606589
Proteins after pattern filtering: 20529
 Total fragments: 130328
Proteins after MINT filtering: 6
 Total fragments: 113


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

PSIDRSTKP

6.15

-12.18

0.00

Best peptides

MGRPRHVRR

0.00

-10.79

1.39

         
Interactors      
Q9QUN3

KGPPSVPRR

8.73

-10.78

1.40

PQVPPKPKD

11.61

-6.76

5.42

PVFPPTQKP

11.65

-7.56

4.62

P70218

GPPPRTPRP

9.19

-12.81

-0.63

PSLWNPAAP

13.03

-5.37

6.81

PPRTPRPGP

13.57

-6.43

5.75

Q80U87

PSKLPTQMP

11.61

-8.33

3.85

PSTPPTHKV

12.39

-5.85

6.33

PEMAPSSAP

14.07

-4.41

7.77

Q9Z1S8

APPPRPPKP

10.78

-9.35

2.83

SAIAPPPRP

10.93

-8.86

3.32

GSPSPHRKP

12.21

-5.90

6.28

O35601

DSKPRFPRH

8.56

-10.32

1.86

FLKPVSPKP

11.35

-7.02

5.16

DLKTPGPKP

11.77

-7.17

5.01

Q9QYY0

IPPPRPPKP

10.26

-10.18

2.00

SSPKTPPRR

10.59

-9.75

2.43

KTPPRRPVP

11.41

-9.89

2.29

 


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