ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2C0T3.PDB
Scoring matrix: 2C0T3_mat
Uniprot code: P08631
Genome source: Homo sapiens
Wild-type ligand: CMSSKPQKPWEKDA
Foldx wt ligand score: 8.14
Foldx random average score for Homo sapiens: 12.461

Available information for P08631 in MINT (Nov 2008):
Nš of interacting proteins: 16
 Proteins belonging to other specie: 7
Nš of interactions described: 37
 Interactions with other species: 17

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 7698
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 40363
 Total fragments: 18066739
Proteins after random average filtering: 40322
 Total fragments: 8947988
Proteins after disorder filtering: 26722
 Total fragments: 394485
Proteins after pattern filtering: 19606
 Total fragments: 177265
Proteins after MINT filtering: 6
 Total fragments: 166


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

CMSSKPQKPWEKDA

8.14

-11.01

0.00

Best peptides

WRDDKPYRFYQMWE

0.00

-16.24

-5.23

         
Interactors      
Q92556

IPDAPPPIPKEPSN

6.85

-13.14

-2.13

O43516

ETPRLPQRNLSLSS

6.80

-12.06

-1.05

ALDDKPPPPPPPVG

7.53

-12.10

-1.09

PFSNRPPLPPTPSR

7.58

-12.31

-1.30

Q13177

KPPAPPVRMSSTIF

9.71

-10.46

0.55

EKDGFPSGTPALNA

9.73

-8.83

2.18

P42768

NEERRGGLPPLPLH

7.92

-12.38

-1.37

RRGGLPPLPLHPGG

8.28

-13.57

-2.56

NQLPRPPIVGGNKG

9.23

-12.68

-1.67

Q13444

PAKPPPPRKPLPAD

7.22

-12.94

-1.93

PPPPRKPLPADPQG

7.42

-12.47

-1.46

ERPGPPQRALLARG

9.55

-10.89

0.12

P21860

QSCPLHPVPIMPTA

9.75

-10.40

0.61

PLHPVPIMPTAGTT

9.90

-11.24

-0.23

LTPVTPLSPPGLEE

10.36

-11.13

-0.12

 


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