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Matrix information:
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ADAN-name: 2AK53.PDB
Scoring matrix: 2AK53_mat
Uniprot code: O55043
Genome source: Rattus norvegicus
Wild-type ligand: RPPKPRPR
Foldx wt ligand score: 1.91
Foldx random average score for Rattus norvegicus: 8.845 Available information for O55043 in MINT (Nov 2008):
Nš of interacting proteins: 5
Proteins belonging to other specie: 0
Nš of interactions described: 6
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Rattus norvegicus: 15006
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 3052
Total scanned proteins: 11953
Total fragments: 5568250
Proteins after random average filtering: 11953
Total fragments: 2580861
Proteins after disorder filtering: 8862
Total fragments: 142467
Proteins after pattern filtering: 5456
Total fragments: 30670
Proteins after MINT filtering: 5
Total fragments: 146
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
RPPKPRPR |
1.91
|
-12.19 |
0.00 |
| Best peptides |
RRLLGQFD |
0.00
|
-12.58 |
-0.39 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P35465 |
KPLPPNPE |
6.00
|
-9.26 |
2.93 |
|
HGSKPLPP |
6.12
|
-9.07 |
3.12 |
|
LPPNPEEK |
7.25
|
-7.14 |
5.05 |
| Q9QX74 |
RMQPSKFP |
3.73
|
-10.13 |
2.06 |
|
RKKAPPPP |
4.22
|
-11.49 |
0.70 |
|
KEILPTPP |
5.47
|
-9.06 |
3.13 |
| Q9Z272 |
RQPPGPVP |
5.70
|
-9.14 |
3.05 |
|
VPVPSLPS |
7.88
|
-7.04 |
5.15 |
| Q9JLU4 |
RGPLASPA |
3.81
|
-10.98 |
1.21 |
|
RPGTPELA |
3.99
|
-10.28 |
1.91 |
|
RRRAPPPP |
4.06
|
-10.46 |
1.73 |
| Q9WV48 |
RQPRGRPS |
1.77
|
-11.82 |
0.37 |
|
RRVLPTSP |
3.39
|
-11.18 |
1.01 |
|
RPPSPRYD |
3.56
|
-11.39 |
0.80 |
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