|
Matrix information:
(Help)
ADAN-name: 2AK52.PDB
Scoring matrix: 2AK52_mat
Uniprot code: O55043
Genome source: Rattus norvegicus
Wild-type ligand: RPPKPRPR
Foldx wt ligand score: 1.85
Foldx random average score for Rattus norvegicus: 7.469 Available information for O55043 in MINT (Nov 2008):
Nš of interacting proteins: 5
Proteins belonging to other specie: 0
Nš of interactions described: 6
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Rattus norvegicus: 15006
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 3052
Total scanned proteins: 11953
Total fragments: 5568250
Proteins after random average filtering: 11951
Total fragments: 2618659
Proteins after disorder filtering: 8847
Total fragments: 209221
Proteins after pattern filtering: 6133
Total fragments: 69436
Proteins after MINT filtering: 5
Total fragments: 468
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
RPPKPRPR |
1.85
|
-11.29 |
0.00 |
| Best peptides |
DMPRPPNR |
0.00
|
-12.70 |
-1.41 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P35465 |
KPPAPPMR |
1.70
|
-11.76 |
-0.47 |
|
PPPVIAPR |
2.87
|
-10.55 |
0.74 |
|
DKPPAPPM |
3.45
|
-9.48 |
1.81 |
| Q9QX74 |
KAPPPPKR |
1.70
|
-11.79 |
-0.50 |
|
KRPQPPHW |
2.81
|
-9.91 |
1.38 |
|
PTPGAAPR |
2.91
|
-9.55 |
1.74 |
| Q9Z272 |
VPSLPSER |
4.68
|
-8.36 |
2.93 |
|
PVPVPSLP |
5.21
|
-7.28 |
4.01 |
|
QPPGPVPV |
5.28
|
-7.34 |
3.95 |
| Q9JLU4 |
ERPKRRPR |
1.29
|
-11.43 |
-0.14 |
|
PPPPPPGR |
1.58
|
-11.61 |
-0.32 |
|
RAPPPPKR |
1.69
|
-11.01 |
0.28 |
| Q9WV48 |
GTPQPPPR |
1.73
|
-11.53 |
-0.24 |
|
GVPPPSPR |
1.87
|
-10.72 |
0.57 |
|
GPPGPRLR |
1.97
|
-11.61 |
-0.32 |
|
