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Matrix information:
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ADAN-name: 1YBO2.PDB
Scoring matrix: 1YBO2_mat
Uniprot code: O00560
Genome source: Homo sapiens
Wild-type ligand: TNEFYA
Foldx wt ligand score: 5.17
Foldx random average score for Homo sapiens: 9.956 Available information for O00560 in MINT (Nov 2008):
Nš of interacting proteins: 2
Proteins belonging to other specie: 0
Nš of interactions described: 3
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 3688
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 44373
Total fragments: 20718635
Proteins after random average filtering: 44367
Total fragments: 11936058
Proteins after disorder filtering: 35456
Total fragments: 1524198
Proteins after pattern filtering: 26709
Total fragments: 139487
Proteins after MINT filtering: 1
Total fragments: 4
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
TNEFYA |
5.17
|
-10.21 |
0.00 |
| Best peptides |
WGMFMA |
0.00
|
-11.63 |
-1.42 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P30203 |
QPAFSA |
5.41
|
-7.50 |
2.71 |
|
SPKSKL |
6.15
|
-8.07 |
2.14 |
|
PTTIPA |
7.31
|
-7.65 |
2.56 |
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