ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1WA72.PDB
Scoring matrix: 1WA72_mat
Uniprot code: P07948
Genome source: Homo sapiens
Wild-type ligand: GMPTPPLPPRPANLGER
Foldx wt ligand score: 16.24
Foldx random average score for Homo sapiens: 42.735

Available information for P07948 in MINT (Nov 2008):
Nš of interacting proteins: 20
 Proteins belonging to other specie: 7
Nš of interactions described: 31
 Interactions with other species: 15

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 48060
 Total fragments: 21767800
Proteins after random average filtering: 47995
 Total fragments: 9646494
Proteins after disorder filtering: 29529
 Total fragments: 897475
Proteins after pattern filtering: 21433
 Total fragments: 351238
Proteins after MINT filtering: 10
 Total fragments: 226


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

GMPTPPLPPRPANLGER

16.24

5.38

0.00

Best peptides

DMENIPPMGGPGSMGGG

0.00

18.23

12.85

         
Interactors      
P22681

DPFDPRGSGSLLRQGAE

14.03

7.09

1.71

PLPVPKLPPGEQCEGEE

15.12

6.68

1.30

PSRDKLPPVPSSRLGDS

16.56

3.54

-1.84

Q07666

SRQPPLPHRSRGGGGGS

11.71

2.53

-2.85

RGRGAAPPPPPVPRGRG

12.89

1.67

-3.71

RGAAPPPPPVPRGRGVG

15.04

7.31

1.93

P14317

ISSEAWPPVGTPPSSES

21.64

12.98

7.60

SEAWPPVGTPPSSESEP

32.96

16.91

11.53

KISSEAWPPVGTPPSSE

41.59

23.13

17.75

Q13444

SERPGPPQRALLARGTK

12.98

5.69

0.31

RKPLPADPQGRCPSGDL

14.36

7.04

1.66

KPPPPRKPLPADPQGRC

20.57

2.89

-2.49

P29353

SHLGATLPVGQPVGGDP

12.13

6.29

0.91

NAQTPSHLGATLPVGQP

15.57

8.32

2.94

ARPTAPNAQTPSHLGAT

17.97

5.64

0.26

P43405

TQGNVNFGGRPQLPGSH

25.46

6.24

0.86

QGNVNFGGRPQLPGSHP

30.82

17.39

12.01

NFGGRPQLPGSHPATWS

31.32

21.29

15.91

Q05397

PPKKPPRPGAPGHLGSL

12.51

8.27

2.89

KPSRPGYPSPRSSEGFY

20.84

4.16

-1.22

RPGAPGHLGSLASLSSP

21.86

17.20

11.82

Q99759

IYQPPEPRSRHLSVSSQ

27.76

18.19

12.81

NTIYQPPEPRSRHLSVS

29.00

19.28

13.90

YQPPEPRSRHLSVSSQN

31.32

16.22

10.84

Q13177

PAPPVRMSSTIFSTGGK

19.10

4.71

-0.67

KPPAPPVRMSSTIFSTG

28.58

17.39

12.01

PPAPPVRMSSTIFSTGG

33.76

22.86

17.48

Q15642

GKKNKPRPPPLSPLGGP

16.76

2.29

-3.09

DPPASAPPDSSSNSASQ

17.47

11.27

5.89

RPPPLSPLGGPVPSALP

20.52

8.52

3.14

 


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