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Matrix information:
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ADAN-name: 1UJ02.PDB
Scoring matrix: 1UJ02_mat
Uniprot code: O88811
Genome source: Mus musculus
Wild-type ligand: TPMVNRENK
Foldx wt ligand score: 4.55
Foldx random average score for Mus musculus: 11.972 Available information for O88811 in MINT (Nov 2008):
Nš of interacting proteins: 2
Proteins belonging to other specie: 1
Nš of interactions described: 3
Interactions with other species: 1
Genome scanning information:
Subcellular location: True
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 6057
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 38389
Total fragments: 17467740
Proteins after random average filtering: 38387
Total fragments: 8364547
Proteins after disorder filtering: 26188
Total fragments: 375479
Proteins after pattern filtering: 16509
Total fragments: 83647
Proteins after MINT filtering: 1
Total fragments: 3
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
TPMVNRENK |
4.55
|
-10.63 |
0.00 |
| Best peptides |
RPRIPRHRR |
0.00
|
-10.63 |
0.00 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q80U87 |
VPSKLPTQM |
9.28
|
-4.62 |
6.01 |
|
PPSTPPTHK |
9.68
|
-4.23 |
6.40 |
|
PPEMAPSSA |
11.35
|
-3.89 |
6.74 |
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