ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1TP52.PDB
Scoring matrix: 1TP52_mat
Uniprot code: P31016
Genome source: Rattus norvegicus
Wild-type ligand: KKETWV
Foldx wt ligand score: 3.1
Foldx random average score for Rattus norvegicus: 8.511

Available information for P31016 in MINT (Nov 2008):
Nš of interacting proteins: 55
 Proteins belonging to other specie: 18
Nš of interactions described: 141
 Interactions with other species: 34

Genome scanning information:
Subcellular location: True
Proteins in genome Rattus norvegicus: 15006
Proteins located in other compartments: 2291
Proteins considered as fragments or having non-standard amino acids: 3052
Total scanned proteins: 9663
 Total fragments: 4588057
Proteins after random average filtering: 9663
 Total fragments: 2933064
Proteins after disorder filtering: 7563
 Total fragments: 214772
Proteins after pattern filtering: 5852
 Total fragments: 28684
Proteins after MINT filtering: 28
 Total fragments: 265


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

KKETWV

3.10

-11.46

0.00

Best peptides

RMMIMV

0.00

-14.38

-2.92

         
Interactors      
Q6IN36

QRNLSL

4.45

-10.55

0.91

GGLFQA

5.19

-6.81

4.65

HPISDL

5.24

-10.48

0.98

Q8R4T5

ETPASV

5.19

-7.71

3.75

GPLLAA

6.00

-7.45

4.01

SAETPA

6.81

-8.35

3.11

Q63226

NDDYTL

3.57

-10.59

0.87

KTMSSI

4.55

-9.82

1.64

TLGLNL

4.68

-10.19

1.27

Q62765

PVMVYI

3.04

-13.27

-1.81

PDDVPL

3.40

-10.91

0.55

PLRITV

3.48

-12.19

-0.73

P15385

GGYSSV

5.74

-8.24

3.22

CSYTDL

6.45

-8.46

3.00

PHCSDL

6.71

-9.05

2.41

Q71RJ2

RDASPV

4.71

-10.16

1.30

ASPVGV

5.38

-7.66

3.80

Q9WV48

PLLLQL

3.19

-11.97

-0.51

TRLLSL

3.59

-12.33

-0.87

GRSMSV

3.77

-9.96

1.50

Q8K430

SPTLSV

4.56

-10.52

0.94

DGSSSL

6.32

-7.70

3.76

Q9QX19

RGRLPA

6.71

-7.98

3.48

VASSPA

7.26

-5.08

6.38

Q00960

PLDIGL

4.20

-9.98

1.48

ANKSSV

4.44

-9.72

1.74

GSGYML

4.64

-9.57

1.89

Q9JJ40

PISAPL

4.94

-10.60

0.86

VKEAPA

5.94

-7.14

4.32

EAPAPI

6.15

-5.53

5.93

P11506

GDGLQL

4.49

-9.60

1.86

GLQLPA

5.39

-9.24

2.22

DSGINL

5.61

-9.84

1.62

P97924

PYQFRV

3.87

-9.24

2.22

RKSFDL

3.99

-9.85

1.61

YSSVPV

4.42

-10.04

1.42

P30937

PATLPL

5.26

-10.42

1.04

NTPATL

5.95

-8.10

3.36

TPGINA

6.69

-8.71

2.75

P05696

KHKFKI

5.13

-11.48

-0.02

DPYVKL

5.56

-10.75

0.71

Q9WUL3

QGSYMV

3.39

-9.77

1.69

GKKARL

3.76

-11.80

-0.34

KARLQL

4.37

-7.95

3.51

P20595

DPQFHL

4.28

-12.21

-0.75

Q9QUH6

KDLFYV

1.42

-11.89

-0.43

MDMARL

3.02

-10.98

0.48

PPQITI

4.76

-11.45

0.01

P70587

DKGIFV

3.79

-12.31

-0.85

TPETEV

4.00

-11.97

-0.51

IFVTRV

4.14

-11.79

-0.33

Q9Z1T4

CLNAPV

3.97

-10.23

1.23

LQDLYI

4.38

-12.04

-0.58

PRSFTL

4.84

-9.91

1.55

Q62936

YGDWQV

4.02

-10.69

0.77

EPSLSV

4.27

-9.23

2.23

RTKAKL

4.67

-10.57

0.89

P97836

YLLSPV

3.70

-10.14

1.32

DGDMCL

4.71

-9.03

2.43

HKPYLL

4.92

-11.12

0.34

P35439

VGNTNI

5.63

-10.65

0.81

FTPTPV

5.76

-8.73

2.73

Q63622

EYKTSL

4.52

-10.30

1.16

YPHYHL

5.00

-11.06

0.40

GLGFSI

5.22

-9.26

2.20

Q62868

MDSSSI

5.82

-7.80

3.66

P29476

PKTIRV

3.84

-12.48

-1.02

VPCILV

3.98

-12.11

-0.65

APSFHL

4.10

-11.64

-0.18

Q00959

EPSFHL

4.19

-11.22

0.24

SCLSNL

4.32

-10.17

1.29

GNKSSL

4.85

-9.64

1.82

Q9WVI4

CPLSKL

5.22

-10.89

0.57

 


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