ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1QG12.PDB
Scoring matrix: 1QG12_mat
Uniprot code: P62993
Genome source: Homo sapiens
Wild-type ligand: DDPSyVNVQNLDK
Foldx wt ligand score: 24.03
Foldx random average score for Homo sapiens: 25.072

Available information for P62993 in MINT (Nov 2008):
Nš of interacting proteins: 64
 Proteins belonging to other specie: 6
Nš of interactions described: 157
 Interactions with other species: 28

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 15831
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 32230
 Total fragments: 13419065
Proteins after random average filtering: 32192
 Total fragments: 7118672
Proteins after disorder filtering: 23385
 Total fragments: 744869
Proteins after pattern filtering: 11841
 Total fragments: 121611
Proteins after MINT filtering: 7
 Total fragments: 109


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

DDPSyVNVQNLDK

24.03

2.21

0.00

Best peptides

DDGGGyGGyssps

0.00

10.74

8.53

         
Interactors      
P27986

NGYNETTGERGDF

15.94

2.07

-0.14

GYNETTGERGDFP

23.83

2.48

0.27

Q07889

LPRFPKKYSYPLK

16.95

1.36

-0.85

PKLPPKTYKREHT

19.53

1.54

-0.67

KYSYPLKSPGVRP

20.79

0.02

-2.19

Q9UKW4

VIRNYSGTPPPAL

19.54

3.09

0.88

QVIRNYSGTPPPA

20.24

1.95

-0.26

Q9UQC2

STDSGDSEENYVP

14.82

3.05

0.84

AHHFDSLGYPSTT

15.15

0.99

-1.22

TDSGDSEENYVPM

15.56

-0.32

-2.53

Q6S383

YSVSGSGSTAGSR

11.17

2.14

-0.07

GRRYASGSSASLG

13.24

2.08

-0.13

AYSDPSTGEPATY

14.87

2.71

0.50

Q13905

SHSYGGESPRLSP

15.56

3.20

0.99

GGSHSYGGESPRL

17.23

4.83

2.62

GSHSYGGESPRLS

17.40

2.81

0.60

Q13480

SYCIPTAGMSPSR

16.00

2.54

0.33

SHDSEENYVPMNP

16.73

1.70

-0.51

RAPSASVDSSLYN

17.29

1.80

-0.41

 


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