ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1QAV2.PDB
Scoring matrix: 1QAV2_mat
Uniprot code: Q61234
Genome source: Mus musculus
Wild-type ligand: HLETTFTGDGTPKTIRV
Foldx wt ligand score: 9.81
Foldx random average score for Mus musculus: 19.678

Available information for Q61234 in MINT (Nov 2008):
Nš of interacting proteins: 4
 Proteins belonging to other specie: 2
Nš of interactions described: 11
 Interactions with other species: 2

Genome scanning information:
Subcellular location: True
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 6057
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 38389
 Total fragments: 17160707
Proteins after random average filtering: 38369
 Total fragments: 8871884
Proteins after disorder filtering: 20021
 Total fragments: 210457
Proteins after pattern filtering: 7126
 Total fragments: 13020
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

HLETTFTGDGTPKTIRV

9.81

-16.04

0.00

Best peptides

KRFMTFIGKFDFWMERE

0.00

-15.70

0.34

         
Interactors      

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER