ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1OPL3.PDB
Scoring matrix: 1OPL3_mat
Uniprot code: P00519
Genome source: Homo sapiens
Wild-type ligand: NKPTVYGVSPN
Foldx wt ligand score: 4.9
Foldx random average score for Homo sapiens: 11.724

Available information for P00519 in MINT (Nov 2008):
Nš of interacting proteins: 29
 Proteins belonging to other specie: 2
Nš of interactions described: 54
 Interactions with other species: 4

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 4117
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 43944
 Total fragments: 20285429
Proteins after random average filtering: 43923
 Total fragments: 10181414
Proteins after disorder filtering: 32600
 Total fragments: 817324
Proteins after pattern filtering: 23185
 Total fragments: 209164
Proteins after MINT filtering: 20
 Total fragments: 551


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

NKPTVYGVSPN

4.90

-10.54

0.00

Best peptides

GRPRMPGKWPM

0.00

-11.94

-1.40

         
Interactors      
P06400

TRPPTLSPIPH

6.44

-10.40

0.14

KFPSSPLRIPG

6.70

-9.56

0.98

HIPRSPYKFPS

7.55

-9.23

1.31

P00533

CDPSCPNGSCW

8.77

-7.84

2.70

GLEGCPTNGPK

8.83

-8.23

2.31

PLNPAPSRDPH

8.97

-7.65

2.89

O14746

SRPPRPWDTPC

5.76

-10.52

0.02

PKRPRRGAAPE

6.71

-8.98

1.56

PLPKRPRRGAA

7.45

-9.31

1.23

O15399

EPPLLPGGAPL

5.13

-10.11

0.43

ARCGCPRSHPH

6.85

-8.89

1.65

PLPSPAYPAPG

7.36

-9.47

1.07

P22681

PLPCTPGDCPS

5.47

-9.88

0.66

NRHSLPFSLPS

5.92

-10.68

-0.14

PRPDVPRLGST

7.54

-8.27

2.27

P18031

PRPPKRILEPH

7.89

-10.93

-0.39

DLEPPPEHIPP

10.42

-7.07

3.47

LEPPPEHIPPP

11.36

-8.47

2.07

Q92558

PPPPMHGAGDA

6.50

-8.51

2.03

PSQVIPASEPK

7.84

-7.42

3.12

PGPHVPLMPPS

8.12

-8.06

2.48

O15162

GVPWMPAPQPP

6.94

-9.78

0.76

PPPPAGHSGPG

8.40

-8.21

2.33

PQPPLNCPPGL

8.50

-7.71

2.83

P12931

QTPSKPASADG

9.07

-6.82

3.72

Q8IZP0

PPPPMPQLTPQ

5.99

-10.27

0.27

KPPTVPNDYMT

7.33

-9.11

1.43

SVPPPSGAPPA

8.22

-9.72

0.82

Q13671

PVPVLPGAVPS

4.83

-10.49

0.05

SLPPMPSLQEV

6.83

-9.14

1.40

KAQRGPAGGPV

9.62

-6.41

4.13

P04626

PQPPSPREGPL

7.12

-8.99

1.55

GLQSLPTHDPS

7.34

-9.64

0.90

REGPLPAARPA

8.17

-8.56

1.98

P21860

PIMPTAGTTPD

8.02

-7.66

2.88

LTPVTPLSPPG

8.94

-9.14

1.40

GPGIAPGPEPH

9.06

-5.22

5.32

P04637

EAPRMPEAAPP

7.13

-9.57

0.97

PSWPLSSSVPS

7.60

-9.15

1.39

PTPAAPAPAPS

7.92

-8.03

2.51

O15350

PAPVIPSNTDY

7.54

-7.32

3.22

SYGPVLSPMNK

7.88

-8.16

2.38

PNRGGPGGGPD

8.46

-5.90

4.64

P15941

TPFSIPSHHSD

9.43

-6.05

4.49

DVTSAPDNKPA

9.70

-6.58

3.96

GVTSAPDNRPA

9.92

-7.16

3.38

Q9NYB9

PAPLVPATVPS

6.93

-9.18

1.36

GTPPLPATSAS

7.52

-9.32

1.22

PTPSPPSVFPA

8.41

-8.68

1.86

Q15303

CHPCHPNCTQG

8.66

-7.44

3.10

GHSPPPAYTPM

8.75

-7.74

2.80

DRECHPCHPNC

9.51

-6.57

3.97

P78527

GVWMIPTSDPA

7.16

-9.59

0.95

WMIPTSDPAAN

9.35

-7.48

3.06

TSMSPDYPNPM

9.65

-6.65

3.89

Q09472

SLPPIVDPDPL

4.46

-11.24

-0.70

GQPGMPQGQPG

4.49

-11.66

-1.12

AQPPLPGPPPT

4.62

-10.75

-0.21

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER