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Matrix information:
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ADAN-name: 1NZL2.PDB
Scoring matrix: 1NZL2_mat
Uniprot code: P00524
Genome source: Rous sarcoma virus (strain Schmidt-Ruppin A)
Wild-type ligand: PQyEyIPA
Foldx wt ligand score: 3.4
Foldx random average score for Rous sarcoma virus (strain Schmidt-Ruppin A): 17.295 Available information for P00524 in MINT (Nov 2008):
Nš of interacting proteins: 2
Proteins belonging to other specie: 2
Nš of interactions described: 3
Interactions with other species: 3
Genome scanning information:
Subcellular location: True
Proteins in genome Rous sarcoma virus (strain Schmidt-Ruppin A): 6
Proteins located in other compartments: 2
Proteins considered as fragments or having non-standard amino acids: 0
Total scanned proteins: 4
Total fragments: 2974
Proteins after random average filtering: 4
Total fragments: 1520
Proteins after disorder filtering: 2
Total fragments: 92
Proteins after pattern filtering: 2
Total fragments: 8
Proteins after MINT filtering: 0
Total fragments: 0
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
PQyEyIPA |
3.40
|
-14.67 |
0.00 |
| Best peptides |
PyyEyMGG |
0.00
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-8.00 |
6.67 |
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