Matrix information:
(Help) ADAN-name: 1NZL2.PDB Scoring matrix: 1NZL2_mat Uniprot code: P00524 Genome source: Rous sarcoma virus (strain Schmidt-Ruppin A) Wild-type ligand: PQyEyIPA Foldx wt ligand score: 3.4 Foldx random average score for Rous sarcoma virus (strain Schmidt-Ruppin A): 17.295 Available information for P00524 in MINT (Nov 2008): Nš of interacting proteins: 2 Proteins belonging to other specie: 2 Nš of interactions described: 3 Interactions with other species: 3
Genome scanning information:
Subcellular location: True Proteins in genome Rous sarcoma virus (strain Schmidt-Ruppin A): 6
Proteins located in other compartments: 2 Proteins considered as fragments or having non-standard amino acids: 0 Total scanned proteins: 4 Total fragments: 2974 Proteins after random average filtering: 4 Total fragments: 1520 Proteins after disorder filtering: 2 Total fragments: 92 Proteins after pattern filtering: 2 Total fragments: 8 Proteins after MINT filtering: 0 Total fragments: 0
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
PQyEyIPA |
3.40
|
-14.67 |
0.00 |
Best peptides |
PyyEyMGG |
0.00
|
-8.00 |
6.67 |
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Interactors |
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