|
Matrix information:
(Help)
ADAN-name: 1N7T2.PDB
Scoring matrix: 1N7T2_mat
Uniprot code: Q96RT1
Genome source: Homo sapiens
Wild-type ligand: TGWETWV
Foldx wt ligand score: 3.02
Foldx random average score for Homo sapiens: 10.186 Available information for Q96RT1 in MINT (Nov 2008):
Nš of interacting proteins: 7
Proteins belonging to other specie: 1
Nš of interactions described: 17
Interactions with other species: 1
Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 16236
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 31825
Total fragments: 13411037
Proteins after random average filtering: 31815
Total fragments: 7314496
Proteins after disorder filtering: 24412
Total fragments: 549098
Proteins after pattern filtering: 18044
Total fragments: 78592
Proteins after MINT filtering: 2
Total fragments: 18
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
TGWETWV |
3.02
|
-7.68 |
0.00 |
| Best peptides |
PGWMDPV |
0.00
|
-4.07 |
3.61 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| O00192 |
PDGYSTV |
6.11
|
-3.86 |
3.82 |
|
DDSTLPL |
6.23
|
-4.03 |
3.65 |
|
HREAFPV |
6.24
|
-3.95 |
3.73 |
| Q99569 |
RSGMTAV |
5.83
|
-4.11 |
3.57 |
|
GSLRTSL |
6.05
|
-3.57 |
4.11 |
|
PWRSTDV |
6.50
|
-2.60 |
5.08 |
|
