ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1KSW3.PDB
Scoring matrix: 1KSW3_mat
Uniprot code: P12931
Genome source: Homo sapiens
Wild-type ligand: KPQTQGLAKD
Foldx wt ligand score: 6.67
Foldx random average score for Homo sapiens: 10.776

Available information for P12931 in MINT (Nov 2008):
Nš of interacting proteins: 50
 Proteins belonging to other specie: 11
Nš of interactions described: 106
 Interactions with other species: 20

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 48060
 Total fragments: 22103987
Proteins after random average filtering: 48045
 Total fragments: 11639522
Proteins after disorder filtering: 35197
 Total fragments: 817509
Proteins after pattern filtering: 23686
 Total fragments: 171124
Proteins after MINT filtering: 26
 Total fragments: 311


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

KPQTQGLAKD

6.67

-8.07

0.00

Best peptides

YPAMGGWWYC

0.00

-9.27

-1.20

         
Interactors      
Q13177

KPPAPPVRMS

9.81

-10.24

-2.17

PPAPPVRMSS

10.09

-8.16

-0.09

PAPPVRMSST

10.62

-6.48

1.59

Q8TBB1

RSNTPKPLHP

10.64

-8.89

-0.82

Q8WUM4

FPQPPQQSYY

6.00

-11.30

-3.23

YPGYPGYCQM

6.79

-8.21

-0.14

PTYPGYPGYC

7.46

-9.05

-0.98

Q16832

PVQPSGPEGV

9.05

-4.49

3.58

KPVQPSGPEG

10.11

-7.50

0.57

SEALPTSPMA

10.44

-8.27

-0.20

Q05193

PPVPSRPGAS

8.27

-9.37

-1.30

VPSRPGASPD

8.74

-8.05

0.02

PQVPSRPNRA

8.85

-7.34

0.73

P15941

SAPDNRPALG

9.31

-7.86

0.21

PVTRPALGST

10.23

-5.94

2.13

PATEPASGSA

10.42

-4.18

3.89

P09848

PDPATGPHAC

8.87

-6.53

1.54

FPDPATGPHA

9.31

-9.13

-1.06

P00533

VPKRPAGSVQ

8.13

-9.50

-1.43

PSCPNGSCWG

8.50

-6.21

1.86

DPSCPNGSCW

8.73

-7.27

0.80

P49407

PPNLPCSVTL

8.93

-9.18

-1.11

FEIPPNLPCS

9.59

-9.51

-1.44

EIPPNLPCSV

9.63

-7.99

0.08

P22681

RPPKPFPRRI

6.03

-10.12

-2.05

LPPVPSSRLG

6.73

-9.87

-1.80

LPCTPGDCPS

6.84

-9.29

-1.22

P18031

PPRPPKRILE

7.52

-10.43

-2.36

IPPPPRPPKR

8.08

-10.98

-2.91

LSPEHGPVVV

8.78

-6.92

1.15

P03372

PPPQLSPFLQ

8.02

-8.68

-0.61

LPYGPGSEAA

8.07

-7.71

0.36

PYGPGSEAAA

9.26

-6.39

1.68

P49023

GPPKPGSQLD

7.09

-8.27

-0.20

PPPPSSEALN

8.20

-9.48

-1.41

VPPPPSSEAL

8.34

-8.55

-0.48

Q05397

RPGAPGHLGS

6.31

-8.46

-0.39

PPRPGAPGHL

7.81

-8.15

-0.08

KPPRPGAPGH

8.34

-8.63

-0.56

P50570

IPSRPGPQSV

7.50

-8.40

-0.33

RGPTPGPPLI

7.85

-8.80

-0.73

FPAPPQIPSR

8.71

-9.31

-1.24

Q07666

PPVPRGRGVG

6.29

-9.07

-1.00

QPPLPHRSRG

6.88

-10.48

-2.41

PPLPHRSRGG

8.21

-7.38

0.69

Q9C0H9

SPRSPGGRRG

7.25

-7.61

0.46

PPSPPLNLHE

7.66

-9.47

-1.40

PKAPHGQKAA

7.66

-6.66

1.41

P55196

LPPEKLPYLV

5.67

-10.63

-2.56

SPQLPWAEYS

6.44

-10.48

-2.41

PKKLPGDDRL

6.84

-10.02

-1.95

P00519

KPSQPGEGLK

5.19

-9.39

-1.32

VPEMPHSKGQ

6.14

-10.09

-2.02

SPLLPRKERG

6.52

-9.20

-1.13

Q9H5V8

MPRQPKKFQK

7.11

-8.73

-0.66

PRQPKKFQKG

8.07

-8.44

-0.37

TEMPRQPKKF

8.63

-5.91

2.16

Q13444

RPGPPQRALL

6.13

-11.12

-3.05

LPSWPLPNIG

7.00

-10.40

-2.33

KPLPADPQGR

7.49

-8.19

-0.12

Q06124

HGVPSDPGGV

10.40

-5.78

2.29

PPCTPTPPCA

10.67

-9.00

-0.93

Q9Y5K6

RPKMPGRRLP

5.90

-11.63

-3.56

PPPPPIAKIN

8.25

-10.02

-1.95

KPPPPAKAPA

8.50

-10.13

-2.06

P56945

APAPPASQYT

6.54

-9.96

-1.89

TPAQPQPGLH

7.49

-8.93

-0.86

KDVPDGPLLR

7.58

-9.11

-1.04

P06241

PTPQHYPSFG

10.09

-4.66

3.41

PQHYPSFGVT

10.21

-7.41

0.66

DPTPQHYPSF

10.69

-7.91

0.16

P21860

VPIMPTAGTT

8.09

-9.24

-1.17

PPHPPRPSSL

9.02

-8.34

-0.27

HPVPIMPTAG

9.50

-7.31

0.76

 


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